Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RIPK2O43353 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RIPK2O43353 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RIPK2O43353 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RIPK2O43353 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.27■□□□□ 0.2
RIPK2O43353 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
RIPK2O43353 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.27■□□□□ 0.2
RIPK2O43353 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.27■□□□□ 0.2
RIPK2O43353 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RIPK2O43353 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.27■□□□□ 0.2
RIPK2O43353 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.27■□□□□ 0.2
RIPK2O43353 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.27■□□□□ 0.2
RIPK2O43353 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.27■□□□□ 0.2
RIPK2O43353 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.27■□□□□ 0.2
RIPK2O43353 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.27■□□□□ 0.2
RIPK2O43353 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RIPK2O43353 CLEC4GP1-201ENST00000596555 870 ntBASIC16.27■□□□□ 0.2
RIPK2O43353 AL078644.1-201ENST00000609881 752 ntBASIC16.27■□□□□ 0.2
RIPK2O43353 AC005593.1-201ENST00000624894 515 ntBASIC16.27■□□□□ 0.2
RIPK2O43353 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RIPK2O43353 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RIPK2O43353 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.27■□□□□ 0.19
RIPK2O43353 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
RIPK2O43353 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.27■□□□□ 0.19
RIPK2O43353 AP002414.3-201ENST00000589352 1468 ntBASIC16.27■□□□□ 0.19
RIPK2O43353 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RIPK2O43353 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RIPK2O43353 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RIPK2O43353 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RIPK2O43353 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
RIPK2O43353 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.27■□□□□ 0.19
RIPK2O43353 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RIPK2O43353 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RIPK2O43353 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RIPK2O43353 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RIPK2O43353 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.26■□□□□ 0.19
RIPK2O43353 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RIPK2O43353 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.26■□□□□ 0.19
RIPK2O43353 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RIPK2O43353 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RIPK2O43353 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.26■□□□□ 0.19
RIPK2O43353 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RIPK2O43353 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.26■□□□□ 0.19
RIPK2O43353 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RIPK2O43353 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RIPK2O43353 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RIPK2O43353 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.26■□□□□ 0.19
RIPK2O43353 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RIPK2O43353 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RIPK2O43353 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.26■□□□□ 0.19
RIPK2O43353 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RIPK2O43353 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.26■□□□□ 0.19
RIPK2O43353 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RIPK2O43353 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RIPK2O43353 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.26■□□□□ 0.19
RIPK2O43353 AC105339.3-201ENST00000560043 636 ntBASIC16.26■□□□□ 0.19
RIPK2O43353 MIR4313-201ENST00000580760 101 ntBASIC16.26■□□□□ 0.19
RIPK2O43353 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RIPK2O43353 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
RIPK2O43353 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RIPK2O43353 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RIPK2O43353 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RIPK2O43353 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RIPK2O43353 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RIPK2O43353 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RIPK2O43353 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RIPK2O43353 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RIPK2O43353 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RIPK2O43353 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.26■□□□□ 0.19
RIPK2O43353 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RIPK2O43353 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RIPK2O43353 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.25■□□□□ 0.19
RIPK2O43353 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RIPK2O43353 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RIPK2O43353 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RIPK2O43353 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RIPK2O43353 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.25■□□□□ 0.19
RIPK2O43353 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RIPK2O43353 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RIPK2O43353 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RIPK2O43353 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.25■□□□□ 0.19
RIPK2O43353 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RIPK2O43353 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.25■□□□□ 0.19
RIPK2O43353 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RIPK2O43353 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
RIPK2O43353 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RIPK2O43353 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.25■□□□□ 0.19
RIPK2O43353 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RIPK2O43353 AC073648.2-201ENST00000510116 352 ntBASIC16.25■□□□□ 0.19
RIPK2O43353 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RIPK2O43353 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
RIPK2O43353 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.25■□□□□ 0.19
RIPK2O43353 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.25■□□□□ 0.19
RIPK2O43353 AL009183.1-201ENST00000603760 355 ntBASIC16.25■□□□□ 0.19
RIPK2O43353 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.25■□□□□ 0.19
RIPK2O43353 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.25■□□□□ 0.19
RIPK2O43353 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RIPK2O43353 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RIPK2O43353 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RIPK2O43353 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms