Protein–RNA interactions for Protein: O15467

CCL16, C-C motif chemokine 16, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16O15467 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCL16O15467 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCL16O15467 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CCL16O15467 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCL16O15467 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCL16O15467 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CCL16O15467 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CCL16O15467 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCL16O15467 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCL16O15467 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCL16O15467 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL16O15467 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.56■□□□□ 0.24
CCL16O15467 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL16O15467 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL16O15467 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CCL16O15467 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.56■□□□□ 0.24
CCL16O15467 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.56■□□□□ 0.24
CCL16O15467 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CCL16O15467 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL16O15467 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCL16O15467 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CCL16O15467 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.56■□□□□ 0.24
CCL16O15467 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL16O15467 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CCL16O15467 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.56■□□□□ 0.24
CCL16O15467 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCL16O15467 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.56■□□□□ 0.24
CCL16O15467 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
CCL16O15467 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CCL16O15467 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCL16O15467 AC099336.1-201ENST00000417053 1171 ntBASIC16.56■□□□□ 0.24
CCL16O15467 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.56■□□□□ 0.24
CCL16O15467 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CCL16O15467 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.56■□□□□ 0.24
CCL16O15467 AP001889.1-201ENST00000525414 633 ntBASIC16.56■□□□□ 0.24
CCL16O15467 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.56■□□□□ 0.24
CCL16O15467 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.56■□□□□ 0.24
CCL16O15467 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CCL16O15467 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.56■□□□□ 0.24
CCL16O15467 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.56■□□□□ 0.24
CCL16O15467 MIR4525-201ENST00000580000 75 ntBASIC16.56■□□□□ 0.24
CCL16O15467 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.56■□□□□ 0.24
CCL16O15467 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.56■□□□□ 0.24
CCL16O15467 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL16O15467 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL16O15467 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CCL16O15467 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.56■□□□□ 0.24
CCL16O15467 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.56■□□□□ 0.24
CCL16O15467 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL16O15467 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CCL16O15467 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CCL16O15467 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL16O15467 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL16O15467 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL16O15467 AL607033.1-201ENST00000623900 1599 ntBASIC16.55■□□□□ 0.24
CCL16O15467 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCL16O15467 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.55■□□□□ 0.24
CCL16O15467 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CCL16O15467 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.55■□□□□ 0.24
CCL16O15467 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL16O15467 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCL16O15467 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL16O15467 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL16O15467 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CCL16O15467 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL16O15467 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.55■□□□□ 0.24
CCL16O15467 AC136604.1-201ENST00000418535 575 ntBASIC16.55■□□□□ 0.24
CCL16O15467 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCL16O15467 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.55■□□□□ 0.24
CCL16O15467 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CCL16O15467 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CCL16O15467 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.55■□□□□ 0.24
CCL16O15467 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CCL16O15467 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCL16O15467 RN7SL219P-201ENST00000582872 296 ntBASIC16.55■□□□□ 0.24
CCL16O15467 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
CCL16O15467 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.55■□□□□ 0.24
CCL16O15467 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CCL16O15467 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL16O15467 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL16O15467 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.55■□□□□ 0.24
CCL16O15467 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCL16O15467 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CCL16O15467 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CCL16O15467 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CCL16O15467 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCL16O15467 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCL16O15467 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.54■□□□□ 0.24
CCL16O15467 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CCL16O15467 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
CCL16O15467 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCL16O15467 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CCL16O15467 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.54■□□□□ 0.24
CCL16O15467 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCL16O15467 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCL16O15467 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCL16O15467 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCL16O15467 AC005229.1-201ENST00000392885 409 ntBASIC16.54■□□□□ 0.24
CCL16O15467 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.54■□□□□ 0.24
CCL16O15467 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms