Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CLDN5O00501 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN5O00501 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CLDN5O00501 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN5O00501 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN5O00501 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.82■□□□□ 0.28
CLDN5O00501 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN5O00501 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.82■□□□□ 0.28
CLDN5O00501 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.82■□□□□ 0.28
CLDN5O00501 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN5O00501 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CLDN5O00501 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.82■□□□□ 0.28
CLDN5O00501 AC097359.3-201ENST00000603982 1210 ntBASIC16.82■□□□□ 0.28
CLDN5O00501 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CLDN5O00501 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN5O00501 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN5O00501 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN5O00501 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN5O00501 AL513523.2-202ENST00000427283 2040 ntBASIC16.82■□□□□ 0.28
CLDN5O00501 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN5O00501 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN5O00501 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CLDN5O00501 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN5O00501 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CLDN5O00501 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN5O00501 AL607033.1-201ENST00000623900 1599 ntBASIC16.81■□□□□ 0.28
CLDN5O00501 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN5O00501 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN5O00501 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN5O00501 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN5O00501 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN5O00501 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CLDN5O00501 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CLDN5O00501 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN5O00501 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CLDN5O00501 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN5O00501 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN5O00501 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN5O00501 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN5O00501 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN5O00501 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
CLDN5O00501 KRT18P64-201ENST00000434946 1219 ntBASIC16.81■□□□□ 0.28
CLDN5O00501 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN5O00501 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN5O00501 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN5O00501 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN5O00501 AC190387.1-201ENST00000551683 408 ntBASIC16.81■□□□□ 0.28
CLDN5O00501 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN5O00501 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
CLDN5O00501 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN5O00501 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN5O00501 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN5O00501 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.81■□□□□ 0.28
CLDN5O00501 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.81■□□□□ 0.28
CLDN5O00501 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN5O00501 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN5O00501 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN5O00501 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CLDN5O00501 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN5O00501 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN5O00501 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN5O00501 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN5O00501 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN5O00501 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CLDN5O00501 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
CLDN5O00501 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CLDN5O00501 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN5O00501 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN5O00501 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN5O00501 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN5O00501 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN5O00501 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN5O00501 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN5O00501 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDN5O00501 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN5O00501 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CLDN5O00501 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CLDN5O00501 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN5O00501 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CLDN5O00501 AC007541.1-201ENST00000570282 1469 ntBASIC16.8■□□□□ 0.28
CLDN5O00501 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN5O00501 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN5O00501 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.8■□□□□ 0.28
CLDN5O00501 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CLDN5O00501 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
CLDN5O00501 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN5O00501 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN5O00501 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDN5O00501 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.8■□□□□ 0.28
CLDN5O00501 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN5O00501 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN5O00501 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN5O00501 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN5O00501 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.8■□□□□ 0.28
CLDN5O00501 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDN5O00501 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN5O00501 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN5O00501 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
CLDN5O00501 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.8■□□□□ 0.28
CLDN5O00501 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms