Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.12□□□□□ -0.15
NPIPB4C9JG80 AC136621.1-201ENST00000624017 2304 ntBASIC14.12□□□□□ -0.15
NPIPB4C9JG80 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.11□□□□□ -0.15
NPIPB4C9JG80 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 SERBP1P3-201ENST00000459980 809 ntBASIC14.11□□□□□ -0.15
NPIPB4C9JG80 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 AC092865.5-201ENST00000545435 363 ntBASIC14.11□□□□□ -0.15
NPIPB4C9JG80 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 AL079307.3-201ENST00000556114 283 ntBASIC14.11□□□□□ -0.15
NPIPB4C9JG80 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB4C9JG80 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 AC092127.1-201ENST00000567093 3455 ntBASIC14.1□□□□□ -0.15
NPIPB4C9JG80 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 RPL5P21-201ENST00000404620 815 ntBASIC14.1□□□□□ -0.15
NPIPB4C9JG80 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 HLA-J-203ENST00000494367 1087 ntBASIC14.1□□□□□ -0.15
NPIPB4C9JG80 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 AC069262.1-201ENST00000539058 672 ntBASIC14.1□□□□□ -0.15
NPIPB4C9JG80 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 AC134684.3-201ENST00000641758 218 ntBASIC14.1□□□□□ -0.15
NPIPB4C9JG80 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 AC006058.4-201ENST00000624016 1670 ntBASIC14.1□□□□□ -0.15
NPIPB4C9JG80 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
NPIPB4C9JG80 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms