Protein–RNA interactions for Protein: A5D8V6

VPS37C, Vacuolar protein sorting-associated protein 37C, humanhuman

Predicted RBP Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37CA5D8V6 TNRC18P2-201ENST00000417666 2714 ntBASIC18.72■□□□□ 0.59
VPS37CA5D8V6 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
VPS37CA5D8V6 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.71■□□□□ 0.59
VPS37CA5D8V6 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS37CA5D8V6 AC087481.3-201ENST00000602886 1894 ntBASIC18.71■□□□□ 0.59
VPS37CA5D8V6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS37CA5D8V6 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.71■□□□□ 0.59
VPS37CA5D8V6 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC18.71■□□□□ 0.59
VPS37CA5D8V6 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VPS37CA5D8V6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.71■□□□□ 0.59
VPS37CA5D8V6 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS37CA5D8V6 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS37CA5D8V6 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VPS37CA5D8V6 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
VPS37CA5D8V6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS37CA5D8V6 TPM4P1-201ENST00000436100 807 ntBASIC18.71■□□□□ 0.59
VPS37CA5D8V6 AC074386.1-202ENST00000463561 864 ntBASIC18.71■□□□□ 0.59
VPS37CA5D8V6 RPL13AP23-201ENST00000480739 586 ntBASIC18.71■□□□□ 0.59
VPS37CA5D8V6 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.71■□□□□ 0.59
VPS37CA5D8V6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.71■□□□□ 0.59
VPS37CA5D8V6 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.71■□□□□ 0.59
VPS37CA5D8V6 PDPK2P-202ENST00000562415 1191 ntBASIC18.71■□□□□ 0.59
VPS37CA5D8V6 AL138918.1-201ENST00000568306 659 ntBASIC18.71■□□□□ 0.59
VPS37CA5D8V6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.71■□□□□ 0.59
VPS37CA5D8V6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.71■□□□□ 0.59
VPS37CA5D8V6 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS37CA5D8V6 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VPS37CA5D8V6 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
VPS37CA5D8V6 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC18.71■□□□□ 0.59
VPS37CA5D8V6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 AP002472.1-201ENST00000577490 586 ntBASIC18.7■□□□□ 0.58
VPS37CA5D8V6 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 TMBIM7P-203ENST00000641617 1718 ntBASIC18.7■□□□□ 0.58
VPS37CA5D8V6 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.7■□□□□ 0.58
VPS37CA5D8V6 AC023157.3-201ENST00000619086 2088 ntBASIC18.7■□□□□ 0.58
VPS37CA5D8V6 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS37CA5D8V6 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 LINC02228-204ENST00000642115 2962 ntBASIC18.69■□□□□ 0.58
VPS37CA5D8V6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 AC099522.2-201ENST00000607001 744 ntBASIC18.69■□□□□ 0.58
VPS37CA5D8V6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 AC018892.3-201ENST00000623986 2499 ntBASIC18.69■□□□□ 0.58
VPS37CA5D8V6 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms