Protein–RNA interactions for Protein: A3KMH1

VWA8, von Willebrand factor A domain-containing protein 8, humanhuman

Predictions only

Length 1,905 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VWA8A3KMH1 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.53■□□□□ 0.24
VWA8A3KMH1 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VWA8A3KMH1 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.53■□□□□ 0.24
VWA8A3KMH1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
VWA8A3KMH1 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VWA8A3KMH1 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VWA8A3KMH1 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VWA8A3KMH1 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VWA8A3KMH1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VWA8A3KMH1 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VWA8A3KMH1 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VWA8A3KMH1 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VWA8A3KMH1 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VWA8A3KMH1 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.53■□□□□ 0.24
VWA8A3KMH1 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.53■□□□□ 0.24
VWA8A3KMH1 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.53■□□□□ 0.24
VWA8A3KMH1 ACTBP8-201ENST00000403258 1108 ntBASIC16.53■□□□□ 0.24
VWA8A3KMH1 FAM21FP-201ENST00000426241 1131 ntBASIC16.53■□□□□ 0.24
VWA8A3KMH1 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
VWA8A3KMH1 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VWA8A3KMH1 AC022494.1-201ENST00000466044 728 ntBASIC16.53■□□□□ 0.24
VWA8A3KMH1 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.53■□□□□ 0.24
VWA8A3KMH1 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.53■□□□□ 0.24
VWA8A3KMH1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.52■□□□□ 0.24
VWA8A3KMH1 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.52■□□□□ 0.24
VWA8A3KMH1 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.52■□□□□ 0.24
VWA8A3KMH1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
VWA8A3KMH1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VWA8A3KMH1 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VWA8A3KMH1 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VWA8A3KMH1 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
VWA8A3KMH1 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.52■□□□□ 0.24
VWA8A3KMH1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.52■□□□□ 0.24
VWA8A3KMH1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VWA8A3KMH1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VWA8A3KMH1 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.52■□□□□ 0.23
VWA8A3KMH1 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VWA8A3KMH1 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VWA8A3KMH1 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.52■□□□□ 0.23
VWA8A3KMH1 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
VWA8A3KMH1 MIR1908-201ENST00000410394 80 ntBASIC16.52■□□□□ 0.23
VWA8A3KMH1 AL590640.2-201ENST00000457038 527 ntBASIC16.52■□□□□ 0.23
VWA8A3KMH1 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.52■□□□□ 0.23
VWA8A3KMH1 AC108725.1-201ENST00000495472 409 ntBASIC16.52■□□□□ 0.23
VWA8A3KMH1 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.52■□□□□ 0.23
VWA8A3KMH1 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.52■□□□□ 0.23
VWA8A3KMH1 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
VWA8A3KMH1 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
VWA8A3KMH1 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.52■□□□□ 0.23
VWA8A3KMH1 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
VWA8A3KMH1 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.52■□□□□ 0.23
VWA8A3KMH1 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
VWA8A3KMH1 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
VWA8A3KMH1 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VWA8A3KMH1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
VWA8A3KMH1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
VWA8A3KMH1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
VWA8A3KMH1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
VWA8A3KMH1 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.52■□□□□ 0.23
VWA8A3KMH1 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
VWA8A3KMH1 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VWA8A3KMH1 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.51■□□□□ 0.23
VWA8A3KMH1 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
VWA8A3KMH1 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VWA8A3KMH1 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VWA8A3KMH1 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.51■□□□□ 0.23
VWA8A3KMH1 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.51■□□□□ 0.23
VWA8A3KMH1 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.51■□□□□ 0.23
VWA8A3KMH1 FO681548.1-201ENST00000455617 1132 ntBASIC16.51■□□□□ 0.23
VWA8A3KMH1 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.51■□□□□ 0.23
VWA8A3KMH1 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.51■□□□□ 0.23
VWA8A3KMH1 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.51■□□□□ 0.23
VWA8A3KMH1 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.51■□□□□ 0.23
VWA8A3KMH1 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.51■□□□□ 0.23
VWA8A3KMH1 AP000812.2-201ENST00000538934 718 ntBASIC16.51■□□□□ 0.23
VWA8A3KMH1 AL583810.1-201ENST00000553344 1045 ntBASIC16.51■□□□□ 0.23
VWA8A3KMH1 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VWA8A3KMH1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.51■□□□□ 0.23
VWA8A3KMH1 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.51■□□□□ 0.23
VWA8A3KMH1 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VWA8A3KMH1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VWA8A3KMH1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
VWA8A3KMH1 LTB4R2-202ENST00000528054 3092 ntBASIC16.51■□□□□ 0.23
VWA8A3KMH1 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VWA8A3KMH1 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VWA8A3KMH1 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.51■□□□□ 0.23
VWA8A3KMH1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VWA8A3KMH1 TUBB1P2-201ENST00000422712 1306 ntBASIC16.51■□□□□ 0.23
VWA8A3KMH1 TUBB1P1-201ENST00000503144 1300 ntBASIC16.51■□□□□ 0.23
VWA8A3KMH1 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VWA8A3KMH1 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.51■□□□□ 0.23
VWA8A3KMH1 AC026954.1-201ENST00000429771 1293 ntBASIC16.51■□□□□ 0.23
VWA8A3KMH1 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.51■□□□□ 0.23
VWA8A3KMH1 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VWA8A3KMH1 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.51■□□□□ 0.23
VWA8A3KMH1 RNA5SP412-201ENST00000516234 123 ntBASIC16.51■□□□□ 0.23
VWA8A3KMH1 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
VWA8A3KMH1 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.51■□□□□ 0.23
VWA8A3KMH1 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.51■□□□□ 0.23
VWA8A3KMH1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms