Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.45■□□□□ 0.38
CCDC66A2RUB6 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 CICP20-201ENST00000443330 2801 ntBASIC17.44■□□□□ 0.38
CCDC66A2RUB6 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 AC021087.4-201ENST00000563761 564 ntBASIC17.44■□□□□ 0.38
CCDC66A2RUB6 PRELID1P1-202ENST00000567272 903 ntBASIC17.44■□□□□ 0.38
CCDC66A2RUB6 AC005412.3-201ENST00000580309 715 ntBASIC17.44■□□□□ 0.38
CCDC66A2RUB6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 AC107918.4-202ENST00000641623 219 ntBASIC17.44■□□□□ 0.38
CCDC66A2RUB6 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 AC129492.6-201ENST00000611383 1305 ntBASIC17.44■□□□□ 0.38
CCDC66A2RUB6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC66A2RUB6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 ST20-AS1-201ENST00000560255 4223 ntBASIC17.43■□□□□ 0.38
CCDC66A2RUB6 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 HCG4-201ENST00000418983 998 ntBASIC17.43■□□□□ 0.38
CCDC66A2RUB6 SAPCD2P3-201ENST00000455031 850 ntBASIC17.43■□□□□ 0.38
CCDC66A2RUB6 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 AC012313.10-201ENST00000623509 926 ntBASIC17.43■□□□□ 0.38
CCDC66A2RUB6 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 AP005117.1-202ENST00000581724 1908 ntBASIC17.43■□□□□ 0.38
CCDC66A2RUB6 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC66A2RUB6 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CCDC66A2RUB6 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms