Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 AC025580.3-201ENST00000617932 1424 ntBASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 BCAR1-209ENST00000546196 1340 ntBASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 EHF-205ENST00000527935 557 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 AC104692.2-201ENST00000603054 253 ntBASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 Z83851.2-201ENST00000609564 659 ntBASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 AC004877.2-201ENST00000623941 599 ntBASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 OR2I1P-210ENST00000642037 4691 ntBASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 AC134407.2-201ENST00000625089 1978 ntBASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
LINC00959A0A1B0GUT2 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 GPX1P2-201ENST00000429271 606 ntBASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 CD63-204ENST00000546939 779 ntTSL 3 BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC00959A0A1B0GUT2 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms