Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 MYO15B-237ENST00000642007 4893 ntBASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 OR2I1P-210ENST00000642037 4691 ntBASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
TRAV5A0A0B4J249 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 AP002414.3-201ENST00000589352 1468 ntBASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 SAPCD2P3-201ENST00000455031 850 ntBASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 AC007686.3-201ENST00000619017 3487 ntBASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV5A0A0B4J249 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV5A0A0B4J249 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms