Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 AL031284.1-201ENST00000419297 478 ntBASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 MIR4321-201ENST00000592276 80 ntBASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 AL049840.3-201ENST00000602669 611 ntBASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 AC007064.4-201ENST00000637740 555 ntBASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 AL589702.1-201ENST00000641229 1509 ntBASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 AP001282.1-201ENST00000531301 1499 ntBASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
TRBV6-7A0A0A0MS04 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 AC140658.5-201ENST00000438532 169 ntBASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 AC002347.1-201ENST00000569543 541 ntBASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 AC023141.13-201ENST00000604991 943 ntBASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 AC116407.3-201ENST00000623905 1129 ntBASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV6-7A0A0A0MS04 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms