Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AC010507.1-201ENST00000633895 436 ntBASIC14.34□□□□□ -0.11
COPS3Q9UNS2 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 TMBIM7P-203ENST00000641617 1718 ntBASIC14.34□□□□□ -0.11
COPS3Q9UNS2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 AC006486.2-201ENST00000624246 2199 ntBASIC14.34□□□□□ -0.11
COPS3Q9UNS2 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COPS3Q9UNS2 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
COPS3Q9UNS2 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
COPS3Q9UNS2 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
COPS3Q9UNS2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
COPS3Q9UNS2 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
COPS3Q9UNS2 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
COPS3Q9UNS2 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
COPS3Q9UNS2 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 AC009947.1-201ENST00000444350 727 ntBASIC14.33□□□□□ -0.12
COPS3Q9UNS2 HCG4B-203ENST00000450128 991 ntBASIC14.33□□□□□ -0.12
COPS3Q9UNS2 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.33□□□□□ -0.12
COPS3Q9UNS2 KRT18P34-201ENST00000488218 1270 ntBASIC14.33□□□□□ -0.12
COPS3Q9UNS2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 AL078644.1-201ENST00000609881 752 ntBASIC14.33□□□□□ -0.12
COPS3Q9UNS2 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 AL109954.1-202ENST00000564051 2148 ntBASIC14.33□□□□□ -0.12
COPS3Q9UNS2 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.33□□□□□ -0.12
COPS3Q9UNS2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 AC011477.6-201ENST00000604980 1927 ntBASIC14.33□□□□□ -0.12
COPS3Q9UNS2 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COPS3Q9UNS2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.32□□□□□ -0.12
COPS3Q9UNS2 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
COPS3Q9UNS2 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COPS3Q9UNS2 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
COPS3Q9UNS2 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.32□□□□□ -0.12
COPS3Q9UNS2 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COPS3Q9UNS2 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COPS3Q9UNS2 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.32□□□□□ -0.12
COPS3Q9UNS2 AC073439.1-201ENST00000624121 1774 ntBASIC14.32□□□□□ -0.12
COPS3Q9UNS2 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.32□□□□□ -0.12
COPS3Q9UNS2 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.32□□□□□ -0.12
COPS3Q9UNS2 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.32□□□□□ -0.12
COPS3Q9UNS2 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COPS3Q9UNS2 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.32□□□□□ -0.12
COPS3Q9UNS2 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COPS3Q9UNS2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COPS3Q9UNS2 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
COPS3Q9UNS2 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
COPS3Q9UNS2 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COPS3Q9UNS2 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COPS3Q9UNS2 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COPS3Q9UNS2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.32□□□□□ -0.12
COPS3Q9UNS2 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COPS3Q9UNS2 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COPS3Q9UNS2 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.32□□□□□ -0.12
COPS3Q9UNS2 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.32□□□□□ -0.12
COPS3Q9UNS2 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.32□□□□□ -0.12
COPS3Q9UNS2 AC245100.5-201ENST00000452108 331 ntBASIC14.32□□□□□ -0.12
COPS3Q9UNS2 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.32□□□□□ -0.12
COPS3Q9UNS2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.32□□□□□ -0.12
COPS3Q9UNS2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
COPS3Q9UNS2 UNC93B6-202ENST00000528242 690 ntBASIC14.32□□□□□ -0.12
COPS3Q9UNS2 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms