Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 AC087499.5-201ENST00000452760 1342 ntBASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.8□□□□□ -0.04
NPIPA1Q9UND3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 GAPDHP21-201ENST00000450301 1010 ntBASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.79□□□□□ -0.04
NPIPA1Q9UND3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.78□□□□□ -0.04
NPIPA1Q9UND3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms