Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19■□□□□ 0.63
CLIP2Q9UDT6 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CLIP2Q9UDT6 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CLIP2Q9UDT6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLIP2Q9UDT6 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLIP2Q9UDT6 AL080243.2-201ENST00000418783 582 ntBASIC19■□□□□ 0.63
CLIP2Q9UDT6 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19■□□□□ 0.63
CLIP2Q9UDT6 FAM207CP-201ENST00000443486 507 ntBASIC19■□□□□ 0.63
CLIP2Q9UDT6 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19■□□□□ 0.63
CLIP2Q9UDT6 POU5F1P6-201ENST00000466990 990 ntBASIC19■□□□□ 0.63
CLIP2Q9UDT6 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLIP2Q9UDT6 TERF1P3-201ENST00000505638 1227 ntBASIC19■□□□□ 0.63
CLIP2Q9UDT6 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19■□□□□ 0.63
CLIP2Q9UDT6 AC009407.1-201ENST00000568958 598 ntBASIC19■□□□□ 0.63
CLIP2Q9UDT6 AC026979.3-201ENST00000607315 403 ntBASIC19■□□□□ 0.63
CLIP2Q9UDT6 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLIP2Q9UDT6 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19■□□□□ 0.63
CLIP2Q9UDT6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLIP2Q9UDT6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CLIP2Q9UDT6 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CLIP2Q9UDT6 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19■□□□□ 0.63
CLIP2Q9UDT6 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLIP2Q9UDT6 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CLIP2Q9UDT6 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CLIP2Q9UDT6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLIP2Q9UDT6 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLIP2Q9UDT6 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CLIP2Q9UDT6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLIP2Q9UDT6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 AC009477.1-201ENST00000452936 217 ntBASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 SERBP1P5-201ENST00000510079 1181 ntBASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 MIR4321-201ENST00000592276 80 ntBASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 AL844908.2-201ENST00000609461 460 ntBASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.99■□□□□ 0.63
CLIP2Q9UDT6 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 AL365330.1-201ENST00000607459 531 ntBASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLIP2Q9UDT6 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms