Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 AC138749.3-201ENST00000567691 622 ntBASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 AC116165.1-201ENST00000611806 668 ntBASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLCF1Q9UBD9 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLCF1Q9UBD9 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLCF1Q9UBD9 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLCF1Q9UBD9 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.21□□□□□ -0.14
CLCF1Q9UBD9 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
CLCF1Q9UBD9 AC068587.6-202ENST00000641839 5619 ntBASIC14.21□□□□□ -0.14
CLCF1Q9UBD9 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 AC099568.2-201ENST00000609194 695 ntBASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 AC124067.4-201ENST00000519691 2379 ntBASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
CLCF1Q9UBD9 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 MTHFR-217ENST00000641820 1569 ntBASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 PCDHA14-201ENST00000506751 2298 ntBASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 RPL13P2-201ENST00000440687 659 ntBASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 TIMM17BP1-201ENST00000545713 516 ntBASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms