Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.69□□□□□ -0.06
CLN6Q9NWW5 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.69□□□□□ -0.06
CLN6Q9NWW5 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLN6Q9NWW5 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.69□□□□□ -0.06
CLN6Q9NWW5 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLN6Q9NWW5 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.69□□□□□ -0.06
CLN6Q9NWW5 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLN6Q9NWW5 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLN6Q9NWW5 AC106881.1-201ENST00000605849 3329 ntBASIC14.69□□□□□ -0.06
CLN6Q9NWW5 AC105250.1-201ENST00000509378 2057 ntBASIC14.69□□□□□ -0.06
CLN6Q9NWW5 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLN6Q9NWW5 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 AC090616.6-203ENST00000579186 1945 ntBASIC14.68□□□□□ -0.06
CLN6Q9NWW5 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 AC026396.1-201ENST00000419388 421 ntBASIC14.68□□□□□ -0.06
CLN6Q9NWW5 FGFR3P6-201ENST00000457012 610 ntBASIC14.68□□□□□ -0.06
CLN6Q9NWW5 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CLN6Q9NWW5 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 ELK2BP-201ENST00000415014 1224 ntBASIC14.67□□□□□ -0.06
CLN6Q9NWW5 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 FAM210CP-201ENST00000445714 574 ntBASIC14.67□□□□□ -0.06
CLN6Q9NWW5 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 SCARNA2-201ENST00000458748 420 ntBASIC14.67□□□□□ -0.06
CLN6Q9NWW5 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 GGTLC5P-201ENST00000617623 998 ntBASIC14.67□□□□□ -0.06
CLN6Q9NWW5 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 AC006504.4-201ENST00000592118 1568 ntBASIC14.67□□□□□ -0.06
CLN6Q9NWW5 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLN6Q9NWW5 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLN6Q9NWW5 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.66□□□□□ -0.06
CLN6Q9NWW5 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLN6Q9NWW5 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLN6Q9NWW5 AC012569.1-201ENST00000591191 1524 ntBASIC14.66□□□□□ -0.06
CLN6Q9NWW5 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CLN6Q9NWW5 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
CLN6Q9NWW5 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
CLN6Q9NWW5 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.66□□□□□ -0.06
CLN6Q9NWW5 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLN6Q9NWW5 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms