Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NECTIN3Q9NQS3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NECTIN3Q9NQS3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NECTIN3Q9NQS3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
NECTIN3Q9NQS3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NECTIN3Q9NQS3 LINC01144-201ENST00000626198 1710 ntBASIC15.43■□□□□ 0.06
NECTIN3Q9NQS3 KRT18P28-201ENST00000453838 1332 ntBASIC15.43■□□□□ 0.06
NECTIN3Q9NQS3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 TSEN15P1-201ENST00000423257 515 ntBASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 AC142381.1-201ENST00000426099 345 ntBASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 GPS2P2-201ENST00000430745 888 ntBASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 METTL21AP1-201ENST00000438852 635 ntBASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 AC093724.1-201ENST00000448659 1027 ntBASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 ME2P1-201ENST00000426028 1970 ntBASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.42■□□□□ 0.06
NECTIN3Q9NQS3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 RBPMS2P1-201ENST00000437762 623 ntBASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 AC109322.1-201ENST00000524499 1264 ntBASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NECTIN3Q9NQS3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 147.8 ms