Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 AL365330.1-201ENST00000607459 531 ntBASIC16.57■□□□□ 0.24
HPS4Q9NQG7 AC074044.1-201ENST00000609673 707 ntBASIC16.57■□□□□ 0.24
HPS4Q9NQG7 AL162274.1-201ENST00000617191 1098 ntBASIC16.57■□□□□ 0.24
HPS4Q9NQG7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.57■□□□□ 0.24
HPS4Q9NQG7 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 FLJ38576-201ENST00000623820 2459 ntBASIC16.56■□□□□ 0.24
HPS4Q9NQG7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 RNF216P1-203ENST00000404404 2427 ntBASIC16.56■□□□□ 0.24
HPS4Q9NQG7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HPS4Q9NQG7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms