Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC073150.1-201ENST00000450406 1084 ntBASIC14.55□□□□□ -0.08
CHD8Q9HCK8 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 AC138466.5-201ENST00000624002 808 ntBASIC14.55□□□□□ -0.08
CHD8Q9HCK8 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 BNIP3P1-202ENST00000550043 1585 ntBASIC14.55□□□□□ -0.08
CHD8Q9HCK8 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC14.55□□□□□ -0.08
CHD8Q9HCK8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 AC004522.1-201ENST00000419978 654 ntBASIC14.54□□□□□ -0.08
CHD8Q9HCK8 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 HNRNPA1P42-201ENST00000458678 957 ntBASIC14.54□□□□□ -0.08
CHD8Q9HCK8 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 RBM8B-201ENST00000555532 525 ntBASIC14.54□□□□□ -0.08
CHD8Q9HCK8 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 AP005019.2-201ENST00000615104 511 ntBASIC14.54□□□□□ -0.08
CHD8Q9HCK8 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 AC018463.1-201ENST00000456674 917 ntBASIC14.54□□□□□ -0.08
CHD8Q9HCK8 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 AL132780.4-201ENST00000624870 1135 ntBASIC14.54□□□□□ -0.08
CHD8Q9HCK8 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHD8Q9HCK8 HLA-A-202ENST00000376806 1854 ntBASIC14.54□□□□□ -0.08
CHD8Q9HCK8 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 AL645728.1-201ENST00000366221 2101 ntBASIC14.53□□□□□ -0.08
CHD8Q9HCK8 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 AP000356.3-201ENST00000382243 753 ntBASIC14.53□□□□□ -0.08
CHD8Q9HCK8 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 AC005740.2-201ENST00000511085 419 ntBASIC14.53□□□□□ -0.08
CHD8Q9HCK8 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 RNMTL1P1-201ENST00000454103 560 ntBASIC14.53□□□□□ -0.08
CHD8Q9HCK8 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 HCG18-241ENST00000602290 821 ntTSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms