Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.65■□□□□ 0.58
EFCC1Q9HA90 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
EFCC1Q9HA90 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.64■□□□□ 0.58
EFCC1Q9HA90 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
EFCC1Q9HA90 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
EFCC1Q9HA90 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.64■□□□□ 0.57
EFCC1Q9HA90 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFCC1Q9HA90 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EFCC1Q9HA90 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EFCC1Q9HA90 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFCC1Q9HA90 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFCC1Q9HA90 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EFCC1Q9HA90 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.64■□□□□ 0.57
EFCC1Q9HA90 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EFCC1Q9HA90 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.64■□□□□ 0.57
EFCC1Q9HA90 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.64■□□□□ 0.57
EFCC1Q9HA90 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EFCC1Q9HA90 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.64■□□□□ 0.57
EFCC1Q9HA90 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.64■□□□□ 0.57
EFCC1Q9HA90 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.64■□□□□ 0.57
EFCC1Q9HA90 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.64■□□□□ 0.57
EFCC1Q9HA90 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.64■□□□□ 0.57
EFCC1Q9HA90 RARRES2P5-201ENST00000564013 466 ntBASIC18.64■□□□□ 0.57
EFCC1Q9HA90 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC18.64■□□□□ 0.57
EFCC1Q9HA90 AC020765.3-201ENST00000613051 740 ntBASIC18.64■□□□□ 0.57
EFCC1Q9HA90 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFCC1Q9HA90 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
EFCC1Q9HA90 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.64■□□□□ 0.57
EFCC1Q9HA90 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
EFCC1Q9HA90 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFCC1Q9HA90 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFCC1Q9HA90 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 GPAA1P2-202ENST00000606848 1787 ntBASIC18.63■□□□□ 0.57
EFCC1Q9HA90 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 AL031731.1-201ENST00000642131 2094 ntBASIC18.63■□□□□ 0.57
EFCC1Q9HA90 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 RN7SL190P-201ENST00000582519 257 ntBASIC18.63■□□□□ 0.57
EFCC1Q9HA90 AL022328.1-201ENST00000610050 478 ntBASIC18.63■□□□□ 0.57
EFCC1Q9HA90 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 AC023824.1-201ENST00000562945 2975 ntBASIC18.63■□□□□ 0.57
EFCC1Q9HA90 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFCC1Q9HA90 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFCC1Q9HA90 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFCC1Q9HA90 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFCC1Q9HA90 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFCC1Q9HA90 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EFCC1Q9HA90 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.62■□□□□ 0.57
EFCC1Q9HA90 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EFCC1Q9HA90 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFCC1Q9HA90 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFCC1Q9HA90 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFCC1Q9HA90 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
EFCC1Q9HA90 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFCC1Q9HA90 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EFCC1Q9HA90 FO681548.1-201ENST00000455617 1132 ntBASIC18.62■□□□□ 0.57
EFCC1Q9HA90 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.62■□□□□ 0.57
EFCC1Q9HA90 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.62■□□□□ 0.57
EFCC1Q9HA90 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms