Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC68Q9H2F9 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CCDC68Q9H2F9 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CCDC68Q9H2F9 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CCDC68Q9H2F9 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 AC069224.1-201ENST00000566372 1715 ntBASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 RN7SL589P-201ENST00000481268 310 ntBASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC68Q9H2F9 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 PRAL-201ENST00000624952 3286 ntBASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 TFAMP1-201ENST00000412727 736 ntBASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 AL355306.1-201ENST00000415580 579 ntBASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 AC105233.2-201ENST00000523697 349 ntBASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 AF228730.5-201ENST00000530288 346 ntBASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 AL135744.1-201ENST00000565098 629 ntBASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 AC132872.4-202ENST00000622924 2756 ntBASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC68Q9H2F9 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC68Q9H2F9 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC68Q9H2F9 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC68Q9H2F9 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC68Q9H2F9 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC68Q9H2F9 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC68Q9H2F9 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC68Q9H2F9 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC68Q9H2F9 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC68Q9H2F9 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms