Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 AL691432.1-201ENST00000596308 1422 ntBASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 AL122018.1-201ENST00000446607 2310 ntBASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 CICP4-201ENST00000447359 2812 ntBASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 AC026396.1-201ENST00000419388 421 ntBASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 AC098859.1-201ENST00000502915 1238 ntBASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 AL031008.1-201ENST00000619963 541 ntBASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHACTR1Q9C0D0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PHACTR1Q9C0D0 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.27■□□□□ 0.19
PHACTR1Q9C0D0 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PHACTR1Q9C0D0 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PHACTR1Q9C0D0 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.27■□□□□ 0.19
PHACTR1Q9C0D0 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.27■□□□□ 0.19
PHACTR1Q9C0D0 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PHACTR1Q9C0D0 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 AL645939.2-201ENST00000427340 991 ntBASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 TPM4P1-201ENST00000436100 807 ntBASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.26■□□□□ 0.19
PHACTR1Q9C0D0 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.25■□□□□ 0.19
PHACTR1Q9C0D0 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PHACTR1Q9C0D0 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.25■□□□□ 0.19
PHACTR1Q9C0D0 AC092127.1-201ENST00000567093 3455 ntBASIC16.25■□□□□ 0.19
PHACTR1Q9C0D0 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.25■□□□□ 0.19
PHACTR1Q9C0D0 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.25■□□□□ 0.19
PHACTR1Q9C0D0 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
PHACTR1Q9C0D0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms