Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 CRCP-205ENST00000431089 942 ntTSL 2 BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 AC090616.6-203ENST00000579186 1945 ntBASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 AC025580.3-201ENST00000617932 1424 ntBASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 BCAR1-209ENST00000546196 1340 ntBASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 AC243562.2-201ENST00000561247 970 ntBASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 AP001005.1-201ENST00000571755 1248 ntBASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 Z83851.2-201ENST00000609564 659 ntBASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 AC004877.2-201ENST00000623941 599 ntBASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SHANK2-AS3Q9BTD1 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SHANK2-AS3Q9BTD1 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms