Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 AP001282.1-201ENST00000531301 1499 ntBASIC13.43□□□□□ -0.26
CCL13Q99616 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CCL13Q99616 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
CCL13Q99616 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL13Q99616 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCL13Q99616 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL13Q99616 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL13Q99616 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
CCL13Q99616 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL13Q99616 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL13Q99616 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CCL13Q99616 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CCL13Q99616 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.43□□□□□ -0.26
CCL13Q99616 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.43□□□□□ -0.26
CCL13Q99616 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL13Q99616 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCL13Q99616 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.43□□□□□ -0.26
CCL13Q99616 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL13Q99616 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.43□□□□□ -0.26
CCL13Q99616 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.43□□□□□ -0.26
CCL13Q99616 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.43□□□□□ -0.26
CCL13Q99616 DUX4L27-201ENST00000554796 1261 ntBASIC13.43□□□□□ -0.26
CCL13Q99616 AC069224.1-201ENST00000566372 1715 ntBASIC13.43□□□□□ -0.26
CCL13Q99616 AC051619.7-201ENST00000568314 623 ntBASIC13.43□□□□□ -0.26
CCL13Q99616 CYP4F24P-201ENST00000586049 1580 ntBASIC13.43□□□□□ -0.26
CCL13Q99616 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.43□□□□□ -0.26
CCL13Q99616 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.43□□□□□ -0.26
CCL13Q99616 AC093512.1-201ENST00000617969 520 ntBASIC13.43□□□□□ -0.26
CCL13Q99616 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.43□□□□□ -0.26
CCL13Q99616 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.43□□□□□ -0.26
CCL13Q99616 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
CCL13Q99616 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CCL13Q99616 AC008894.3-201ENST00000624324 3103 ntBASIC13.43□□□□□ -0.26
CCL13Q99616 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL13Q99616 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.43□□□□□ -0.26
CCL13Q99616 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL13Q99616 AC067930.6-201ENST00000623257 4947 ntBASIC13.43□□□□□ -0.26
CCL13Q99616 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL13Q99616 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.43□□□□□ -0.26
CCL13Q99616 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CCL13Q99616 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL13Q99616 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CCL13Q99616 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.42□□□□□ -0.26
CCL13Q99616 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.42□□□□□ -0.26
CCL13Q99616 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CCL13Q99616 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL13Q99616 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL13Q99616 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.42□□□□□ -0.26
CCL13Q99616 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.42□□□□□ -0.26
CCL13Q99616 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CCL13Q99616 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CCL13Q99616 BNIP3P1-202ENST00000550043 1585 ntBASIC13.42□□□□□ -0.26
CCL13Q99616 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CCL13Q99616 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL13Q99616 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.42□□□□□ -0.26
CCL13Q99616 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CCL13Q99616 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL13Q99616 AC004987.2-201ENST00000395959 1148 ntBASIC13.42□□□□□ -0.26
CCL13Q99616 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.42□□□□□ -0.26
CCL13Q99616 MIR943-201ENST00000401286 94 ntBASIC13.42□□□□□ -0.26
CCL13Q99616 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CCL13Q99616 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.42□□□□□ -0.26
CCL13Q99616 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.42□□□□□ -0.26
CCL13Q99616 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.42□□□□□ -0.26
CCL13Q99616 AC069120.2-201ENST00000524091 540 ntBASIC13.42□□□□□ -0.26
CCL13Q99616 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CCL13Q99616 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CCL13Q99616 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.42□□□□□ -0.26
CCL13Q99616 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.42□□□□□ -0.26
CCL13Q99616 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.42□□□□□ -0.26
CCL13Q99616 AC015911.4-201ENST00000588022 1070 ntBASIC13.42□□□□□ -0.26
CCL13Q99616 AL133215.2-201ENST00000609242 977 ntBASIC13.42□□□□□ -0.26
CCL13Q99616 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.42□□□□□ -0.26
CCL13Q99616 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CCL13Q99616 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.42□□□□□ -0.26
CCL13Q99616 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
CCL13Q99616 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL13Q99616 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL13Q99616 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL13Q99616 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CCL13Q99616 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL13Q99616 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CCL13Q99616 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CCL13Q99616 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CCL13Q99616 CETN4P-206ENST00000642099 2168 ntBASIC13.42□□□□□ -0.26
CCL13Q99616 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL13Q99616 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL13Q99616 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL13Q99616 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.42□□□□□ -0.26
CCL13Q99616 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL13Q99616 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.42□□□□□ -0.26
CCL13Q99616 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL13Q99616 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.42□□□□□ -0.26
CCL13Q99616 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
CCL13Q99616 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL13Q99616 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CCL13Q99616 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL13Q99616 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL13Q99616 PRAL-201ENST00000624952 3286 ntBASIC13.41□□□□□ -0.26
CCL13Q99616 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms