Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC13.05□□□□□ -0.32
RAB40CQ96S21 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RAB40CQ96S21 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
RAB40CQ96S21 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAB40CQ96S21 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAB40CQ96S21 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAB40CQ96S21 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAB40CQ96S21 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAB40CQ96S21 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
RAB40CQ96S21 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.05□□□□□ -0.32
RAB40CQ96S21 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.05□□□□□ -0.32
RAB40CQ96S21 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.05□□□□□ -0.32
RAB40CQ96S21 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAB40CQ96S21 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RAB40CQ96S21 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAB40CQ96S21 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RAB40CQ96S21 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.05□□□□□ -0.32
RAB40CQ96S21 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RAB40CQ96S21 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB40CQ96S21 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB40CQ96S21 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 CICP23-201ENST00000605013 2741 ntBASIC13.04□□□□□ -0.32
RAB40CQ96S21 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB40CQ96S21 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB40CQ96S21 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RAB40CQ96S21 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB40CQ96S21 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RAB40CQ96S21 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RAB40CQ96S21 AC012569.1-201ENST00000591191 1524 ntBASIC13.04□□□□□ -0.32
RAB40CQ96S21 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB40CQ96S21 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB40CQ96S21 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB40CQ96S21 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RAB40CQ96S21 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB40CQ96S21 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB40CQ96S21 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB40CQ96S21 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RAB40CQ96S21 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RAB40CQ96S21 AC132008.2-207ENST00000454517 770 ntBASIC13.04□□□□□ -0.32
RAB40CQ96S21 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.04□□□□□ -0.32
RAB40CQ96S21 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RAB40CQ96S21 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RAB40CQ96S21 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB40CQ96S21 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB40CQ96S21 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB40CQ96S21 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
RAB40CQ96S21 AC013726.1-201ENST00000563747 2285 ntBASIC13.04□□□□□ -0.32
RAB40CQ96S21 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB40CQ96S21 AC138969.2-201ENST00000532739 9932 ntBASIC13.04□□□□□ -0.32
RAB40CQ96S21 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB40CQ96S21 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RAB40CQ96S21 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
RAB40CQ96S21 AC112693.3-201ENST00000624819 1983 ntBASIC13.03□□□□□ -0.32
RAB40CQ96S21 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB40CQ96S21 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAB40CQ96S21 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.03□□□□□ -0.32
RAB40CQ96S21 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAB40CQ96S21 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.03□□□□□ -0.32
RAB40CQ96S21 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
RAB40CQ96S21 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB40CQ96S21 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RAB40CQ96S21 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB40CQ96S21 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.03□□□□□ -0.32
RAB40CQ96S21 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RAB40CQ96S21 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.03□□□□□ -0.32
RAB40CQ96S21 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB40CQ96S21 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAB40CQ96S21 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB40CQ96S21 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB40CQ96S21 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.03□□□□□ -0.32
RAB40CQ96S21 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms