Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.04□□□□□ -0.32
ZNF48Q96MX3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.04□□□□□ -0.32
ZNF48Q96MX3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.04□□□□□ -0.32
ZNF48Q96MX3 IGHV3-72-202ENST00000621503 303 ntBASIC13.04□□□□□ -0.32
ZNF48Q96MX3 AC004461.2-201ENST00000629517 803 ntBASIC13.04□□□□□ -0.32
ZNF48Q96MX3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.04□□□□□ -0.32
ZNF48Q96MX3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZNF48Q96MX3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZNF48Q96MX3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZNF48Q96MX3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZNF48Q96MX3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZNF48Q96MX3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.04□□□□□ -0.32
ZNF48Q96MX3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZNF48Q96MX3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.04□□□□□ -0.32
ZNF48Q96MX3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
ZNF48Q96MX3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
ZNF48Q96MX3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.04□□□□□ -0.32
ZNF48Q96MX3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.04□□□□□ -0.32
ZNF48Q96MX3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZNF48Q96MX3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 UBALD1-205ENST00000590891 2641 ntBASIC13.03□□□□□ -0.32
ZNF48Q96MX3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 AC087499.6-201ENST00000411576 835 ntBASIC13.03□□□□□ -0.32
ZNF48Q96MX3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 AL589987.1-201ENST00000453380 819 ntBASIC13.03□□□□□ -0.32
ZNF48Q96MX3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 AC007431.3-201ENST00000623221 587 ntBASIC13.03□□□□□ -0.32
ZNF48Q96MX3 AL109936.8-201ENST00000641772 604 ntBASIC13.03□□□□□ -0.32
ZNF48Q96MX3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 PCGF3-213ENST00000620529 1899 ntBASIC13.03□□□□□ -0.32
ZNF48Q96MX3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 AL391825.1-201ENST00000457671 1364 ntBASIC13.03□□□□□ -0.32
ZNF48Q96MX3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZNF48Q96MX3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZNF48Q96MX3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZNF48Q96MX3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZNF48Q96MX3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZNF48Q96MX3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.02□□□□□ -0.32
ZNF48Q96MX3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.32
ZNF48Q96MX3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZNF48Q96MX3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZNF48Q96MX3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZNF48Q96MX3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ZNF48Q96MX3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.02□□□□□ -0.32
ZNF48Q96MX3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ZNF48Q96MX3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZNF48Q96MX3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms