Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 AC140658.5-201ENST00000438532 169 ntBASIC15.31■□□□□ 0.04
ITCHQ96J02 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.31■□□□□ 0.04
ITCHQ96J02 AC093909.1-201ENST00000504731 1122 ntBASIC15.31■□□□□ 0.04
ITCHQ96J02 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ITCHQ96J02 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
ITCHQ96J02 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.31■□□□□ 0.04
ITCHQ96J02 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.31■□□□□ 0.04
ITCHQ96J02 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ITCHQ96J02 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.31■□□□□ 0.04
ITCHQ96J02 AL049840.3-201ENST00000602669 611 ntBASIC15.31■□□□□ 0.04
ITCHQ96J02 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ITCHQ96J02 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
ITCHQ96J02 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.31■□□□□ 0.04
ITCHQ96J02 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ITCHQ96J02 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ITCHQ96J02 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.31■□□□□ 0.04
ITCHQ96J02 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.31■□□□□ 0.04
ITCHQ96J02 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.31■□□□□ 0.04
ITCHQ96J02 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ITCHQ96J02 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ITCHQ96J02 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ITCHQ96J02 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ITCHQ96J02 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ITCHQ96J02 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.31■□□□□ 0.04
ITCHQ96J02 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ITCHQ96J02 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ITCHQ96J02 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ITCHQ96J02 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ITCHQ96J02 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ITCHQ96J02 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ITCHQ96J02 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.31■□□□□ 0.04
ITCHQ96J02 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ITCHQ96J02 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.31■□□□□ 0.04
ITCHQ96J02 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.31■□□□□ 0.04
ITCHQ96J02 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
ITCHQ96J02 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.31■□□□□ 0.04
ITCHQ96J02 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ITCHQ96J02 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ITCHQ96J02 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
ITCHQ96J02 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.31■□□□□ 0.04
ITCHQ96J02 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ITCHQ96J02 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ITCHQ96J02 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.3■□□□□ 0.04
ITCHQ96J02 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.3■□□□□ 0.04
ITCHQ96J02 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.3■□□□□ 0.04
ITCHQ96J02 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ITCHQ96J02 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ITCHQ96J02 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ITCHQ96J02 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITCHQ96J02 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITCHQ96J02 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
ITCHQ96J02 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.3■□□□□ 0.04
ITCHQ96J02 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITCHQ96J02 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITCHQ96J02 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITCHQ96J02 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.3■□□□□ 0.04
ITCHQ96J02 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITCHQ96J02 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITCHQ96J02 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ITCHQ96J02 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.3■□□□□ 0.04
ITCHQ96J02 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITCHQ96J02 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ITCHQ96J02 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ITCHQ96J02 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITCHQ96J02 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.3■□□□□ 0.04
ITCHQ96J02 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITCHQ96J02 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITCHQ96J02 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.3■□□□□ 0.04
ITCHQ96J02 AC079781.3-201ENST00000449110 356 ntBASIC15.3■□□□□ 0.04
ITCHQ96J02 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ITCHQ96J02 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
ITCHQ96J02 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.3■□□□□ 0.04
ITCHQ96J02 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ITCHQ96J02 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.3■□□□□ 0.04
ITCHQ96J02 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.3■□□□□ 0.04
ITCHQ96J02 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.3■□□□□ 0.04
ITCHQ96J02 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.3■□□□□ 0.04
ITCHQ96J02 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
ITCHQ96J02 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.3■□□□□ 0.04
ITCHQ96J02 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ITCHQ96J02 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.3■□□□□ 0.04
ITCHQ96J02 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.3■□□□□ 0.04
ITCHQ96J02 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.3■□□□□ 0.04
ITCHQ96J02 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITCHQ96J02 AC116407.3-201ENST00000623905 1129 ntBASIC15.3■□□□□ 0.04
ITCHQ96J02 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITCHQ96J02 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ITCHQ96J02 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITCHQ96J02 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ITCHQ96J02 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.3■□□□□ 0.04
ITCHQ96J02 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.3■□□□□ 0.04
ITCHQ96J02 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.3■□□□□ 0.04
ITCHQ96J02 AC006486.2-201ENST00000624246 2199 ntBASIC15.29■□□□□ 0.04
ITCHQ96J02 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
ITCHQ96J02 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.29■□□□□ 0.04
ITCHQ96J02 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.29■□□□□ 0.04
ITCHQ96J02 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ITCHQ96J02 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.29■□□□□ 0.04
ITCHQ96J02 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.29■□□□□ 0.04
ITCHQ96J02 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms