Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9Q92623 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.27■□□□□ 0.04
TTC9Q92623 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.27■□□□□ 0.04
TTC9Q92623 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC9Q92623 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC9Q92623 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TTC9Q92623 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.27■□□□□ 0.04
TTC9Q92623 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC9Q92623 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC9Q92623 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC9Q92623 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC9Q92623 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TTC9Q92623 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TTC9Q92623 AL512652.2-201ENST00000625156 1716 ntBASIC15.27■□□□□ 0.04
TTC9Q92623 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC9Q92623 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC9Q92623 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TTC9Q92623 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.27■□□□□ 0.04
TTC9Q92623 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC9Q92623 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.27■□□□□ 0.04
TTC9Q92623 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TTC9Q92623 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC9Q92623 BCYRN1-201ENST00000418539 200 ntBASIC15.27■□□□□ 0.04
TTC9Q92623 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.27■□□□□ 0.04
TTC9Q92623 RN7SL618P-201ENST00000477850 296 ntBASIC15.27■□□□□ 0.04
TTC9Q92623 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TTC9Q92623 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.27■□□□□ 0.04
TTC9Q92623 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.27■□□□□ 0.04
TTC9Q92623 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.27■□□□□ 0.04
TTC9Q92623 AC020765.3-201ENST00000613051 740 ntBASIC15.27■□□□□ 0.04
TTC9Q92623 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.27■□□□□ 0.03
TTC9Q92623 AC106886.4-201ENST00000623557 2502 ntBASIC15.27■□□□□ 0.03
TTC9Q92623 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.27■□□□□ 0.03
TTC9Q92623 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TTC9Q92623 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TTC9Q92623 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TTC9Q92623 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TTC9Q92623 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
TTC9Q92623 FAM45BP-202ENST00000592932 1624 ntBASIC15.27■□□□□ 0.03
TTC9Q92623 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
TTC9Q92623 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TTC9Q92623 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TTC9Q92623 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.27■□□□□ 0.03
TTC9Q92623 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TTC9Q92623 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.27■□□□□ 0.03
TTC9Q92623 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.27■□□□□ 0.03
TTC9Q92623 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TTC9Q92623 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9Q92623 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.26■□□□□ 0.03
TTC9Q92623 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9Q92623 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9Q92623 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TTC9Q92623 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TTC9Q92623 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9Q92623 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.26■□□□□ 0.03
TTC9Q92623 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9Q92623 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
TTC9Q92623 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.26■□□□□ 0.03
TTC9Q92623 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9Q92623 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9Q92623 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9Q92623 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TTC9Q92623 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.26■□□□□ 0.03
TTC9Q92623 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.26■□□□□ 0.03
TTC9Q92623 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.26■□□□□ 0.03
TTC9Q92623 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9Q92623 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TTC9Q92623 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9Q92623 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9Q92623 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TTC9Q92623 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9Q92623 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.26■□□□□ 0.03
TTC9Q92623 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
TTC9Q92623 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.26■□□□□ 0.03
TTC9Q92623 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.26■□□□□ 0.03
TTC9Q92623 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TTC9Q92623 PRYP6-201ENST00000514804 343 ntBASIC15.26■□□□□ 0.03
TTC9Q92623 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9Q92623 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TTC9Q92623 AL512361.1-201ENST00000554200 418 ntBASIC15.26■□□□□ 0.03
TTC9Q92623 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.26■□□□□ 0.03
TTC9Q92623 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.26■□□□□ 0.03
TTC9Q92623 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9Q92623 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9Q92623 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9Q92623 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TTC9Q92623 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.26■□□□□ 0.03
TTC9Q92623 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TTC9Q92623 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.26■□□□□ 0.03
TTC9Q92623 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.26■□□□□ 0.03
TTC9Q92623 RNF216P1-203ENST00000404404 2427 ntBASIC15.26■□□□□ 0.03
TTC9Q92623 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TTC9Q92623 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9Q92623 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9Q92623 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9Q92623 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9Q92623 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.26■□□□□ 0.03
TTC9Q92623 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.26■□□□□ 0.03
TTC9Q92623 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC9Q92623 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms