Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 DNAJB3-201ENST00000446806 729 ntBASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 KRT18P2-201ENST00000447938 1258 ntBASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB40AQ8WXH6 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 AC023274.1-201ENST00000418278 595 ntBASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 AC004832.2-201ENST00000426397 482 ntBASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 MIR3687-2-201ENST00000577708 61 ntBASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 MIR3687-1-201ENST00000614492 61 ntBASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB40AQ8WXH6 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 AC087481.3-201ENST00000602886 1894 ntBASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 OR2I1P-209ENST00000641730 5365 ntBASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 YBX2P1-201ENST00000394192 760 ntBASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 MIR1233-2-201ENST00000408138 82 ntBASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 MIR1233-1-201ENST00000408722 82 ntBASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 CYP2A7P1-201ENST00000595391 815 ntBASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 MTDHP5-201ENST00000598980 586 ntBASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40AQ8WXH6 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms