Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SNED1Q8TER0 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNED1Q8TER0 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNED1Q8TER0 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNED1Q8TER0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNED1Q8TER0 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SNED1Q8TER0 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNED1Q8TER0 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
SNED1Q8TER0 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNED1Q8TER0 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNED1Q8TER0 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SNED1Q8TER0 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNED1Q8TER0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNED1Q8TER0 AL133267.1-201ENST00000398220 340 ntBASIC19.17■□□□□ 0.66
SNED1Q8TER0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SNED1Q8TER0 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC19.17■□□□□ 0.66
SNED1Q8TER0 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC19.17■□□□□ 0.66
SNED1Q8TER0 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC19.17■□□□□ 0.66
SNED1Q8TER0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNED1Q8TER0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SNED1Q8TER0 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNED1Q8TER0 AP001582.1-201ENST00000525856 295 ntBASIC19.17■□□□□ 0.66
SNED1Q8TER0 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC19.17■□□□□ 0.66
SNED1Q8TER0 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNED1Q8TER0 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC19.17■□□□□ 0.66
SNED1Q8TER0 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC19.17■□□□□ 0.66
SNED1Q8TER0 AD000864.1-201ENST00000624076 2295 ntBASIC19.17■□□□□ 0.66
SNED1Q8TER0 AC015967.2-201ENST00000624092 234 ntBASIC19.17■□□□□ 0.66
SNED1Q8TER0 AC006435.4-201ENST00000625037 234 ntBASIC19.17■□□□□ 0.66
SNED1Q8TER0 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SNED1Q8TER0 AL356737.1-201ENST00000634391 234 ntBASIC19.17■□□□□ 0.66
SNED1Q8TER0 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC19.17■□□□□ 0.66
SNED1Q8TER0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNED1Q8TER0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.16■□□□□ 0.66
SNED1Q8TER0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNED1Q8TER0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNED1Q8TER0 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNED1Q8TER0 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SNED1Q8TER0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNED1Q8TER0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.16■□□□□ 0.66
SNED1Q8TER0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
SNED1Q8TER0 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNED1Q8TER0 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNED1Q8TER0 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SNED1Q8TER0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.16■□□□□ 0.66
SNED1Q8TER0 FOS-206ENST00000555347 1280 ntTSL 2 BASIC19.16■□□□□ 0.66
SNED1Q8TER0 CYGB-203ENST00000589145 788 ntTSL 3 BASIC19.16■□□□□ 0.66
SNED1Q8TER0 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC19.16■□□□□ 0.66
SNED1Q8TER0 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SNED1Q8TER0 AC016629.1-201ENST00000596579 586 ntBASIC19.16■□□□□ 0.66
SNED1Q8TER0 AP005019.2-201ENST00000615104 511 ntBASIC19.16■□□□□ 0.66
SNED1Q8TER0 AC006453.4-201ENST00000636949 1252 ntBASIC19.16■□□□□ 0.66
SNED1Q8TER0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SNED1Q8TER0 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.16■□□□□ 0.66
SNED1Q8TER0 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC19.16■□□□□ 0.66
SNED1Q8TER0 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNED1Q8TER0 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SNED1Q8TER0 ALOX12P2-203ENST00000570921 1945 ntBASIC19.15■□□□□ 0.66
SNED1Q8TER0 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNED1Q8TER0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SNED1Q8TER0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNED1Q8TER0 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNED1Q8TER0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNED1Q8TER0 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNED1Q8TER0 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC19.15■□□□□ 0.66
SNED1Q8TER0 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNED1Q8TER0 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNED1Q8TER0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNED1Q8TER0 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNED1Q8TER0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNED1Q8TER0 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC19.15■□□□□ 0.66
SNED1Q8TER0 AHCYP2-201ENST00000430630 1300 ntBASIC19.15■□□□□ 0.66
SNED1Q8TER0 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC19.15■□□□□ 0.66
SNED1Q8TER0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNED1Q8TER0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SNED1Q8TER0 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNED1Q8TER0 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
SNED1Q8TER0 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNED1Q8TER0 ACTBP8-201ENST00000403258 1108 ntBASIC19.15■□□□□ 0.66
SNED1Q8TER0 BTBD6P1-201ENST00000412176 1267 ntBASIC19.15■□□□□ 0.66
SNED1Q8TER0 HSPB1P2-201ENST00000448722 546 ntBASIC19.15■□□□□ 0.66
SNED1Q8TER0 APOA2-204ENST00000464492 530 ntTSL 3 BASIC19.15■□□□□ 0.66
SNED1Q8TER0 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
SNED1Q8TER0 PARP8-206ENST00000503665 572 ntTSL 4 BASIC19.15■□□□□ 0.66
SNED1Q8TER0 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC19.15■□□□□ 0.66
SNED1Q8TER0 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC19.15■□□□□ 0.66
SNED1Q8TER0 NAT9-224ENST00000583757 583 ntTSL 3 BASIC19.15■□□□□ 0.66
SNED1Q8TER0 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNED1Q8TER0 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNED1Q8TER0 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNED1Q8TER0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNED1Q8TER0 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
SNED1Q8TER0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.14■□□□□ 0.66
SNED1Q8TER0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SNED1Q8TER0 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SNED1Q8TER0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNED1Q8TER0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.14■□□□□ 0.65
SNED1Q8TER0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNED1Q8TER0 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SNED1Q8TER0 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms