Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 MIR648-201ENST00000385046 94 ntBASIC13.92□□□□□ -0.18
BEST4Q8NFU0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 MIR5100-201ENST00000579544 119 ntBASIC13.92□□□□□ -0.18
BEST4Q8NFU0 RN7SL850P-201ENST00000579959 291 ntBASIC13.92□□□□□ -0.18
BEST4Q8NFU0 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 CYP2A7P1-201ENST00000595391 815 ntBASIC13.92□□□□□ -0.18
BEST4Q8NFU0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 AL139424.1-201ENST00000607572 797 ntBASIC13.92□□□□□ -0.18
BEST4Q8NFU0 AC010654.1-201ENST00000615722 808 ntBASIC13.92□□□□□ -0.18
BEST4Q8NFU0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BEST4Q8NFU0 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 AP005117.1-201ENST00000584346 1413 ntBASIC13.91□□□□□ -0.18
BEST4Q8NFU0 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 AC092919.2-201ENST00000623631 1645 ntBASIC13.91□□□□□ -0.18
BEST4Q8NFU0 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 AC087163.2-201ENST00000457299 853 ntBASIC13.91□□□□□ -0.18
BEST4Q8NFU0 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 REXO1L3P-201ENST00000622202 1288 ntBASIC13.91□□□□□ -0.18
BEST4Q8NFU0 AL022326.1-202ENST00000641533 845 ntBASIC13.91□□□□□ -0.18
BEST4Q8NFU0 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.91□□□□□ -0.18
BEST4Q8NFU0 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms