Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 AL645939.2-201ENST00000427340 991 ntBASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 EEF1DP4-201ENST00000446006 880 ntBASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 AL589739.1-201ENST00000607720 493 ntBASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC148Q8NFR7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 AC069120.2-201ENST00000524091 540 ntBASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 AC022188.1-201ENST00000620960 1664 ntBASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 KRT8P37-201ENST00000451609 1420 ntBASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC148Q8NFR7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC148Q8NFR7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
CCDC148Q8NFR7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 HLA-V-204ENST00000476601 1289 ntBASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 AL079307.3-201ENST00000556114 283 ntBASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
CCDC148Q8NFR7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms