Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 PRAL-201ENST00000624952 3286 ntBASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 PKD1P5-201ENST00000532415 10291 ntBASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 LINC02447-202ENST00000501888 2146 ntBASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 AC061975.2-201ENST00000581722 295 ntBASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 AP3S2-216ENST00000617003 1561 ntBASIC15.15■□□□□ 0.02
SIMC1Q8NDZ2 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 AP006288.1-201ENST00000446065 395 ntBASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 AP000344.2-201ENST00000512987 629 ntBASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 KRT8P23-201ENST00000560090 1207 ntBASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SIMC1Q8NDZ2 AC112504.1-201ENST00000623415 1841 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms