Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 AC025678.2-201ENST00000562061 970 ntBASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 Z92544.3-201ENST00000624747 417 ntBASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 PAUPAR-201ENST00000630360 2965 ntBASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATPAF2Q8N5M1 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 REXO1L1P-202ENST00000608646 1974 ntBASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 GPALPP1-207ENST00000611650 899 ntBASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 KRT8P37-201ENST00000451609 1420 ntBASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATPAF2Q8N5M1 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF2Q8N5M1 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF2Q8N5M1 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ATPAF2Q8N5M1 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF2Q8N5M1 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF2Q8N5M1 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF2Q8N5M1 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF2Q8N5M1 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF2Q8N5M1 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.4■□□□□ 0.22
ATPAF2Q8N5M1 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF2Q8N5M1 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF2Q8N5M1 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF2Q8N5M1 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF2Q8N5M1 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF2Q8N5M1 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF2Q8N5M1 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.4■□□□□ 0.22
ATPAF2Q8N5M1 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.4■□□□□ 0.22
ATPAF2Q8N5M1 METTL21AP1-201ENST00000438852 635 ntBASIC16.4■□□□□ 0.22
ATPAF2Q8N5M1 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.4■□□□□ 0.22
ATPAF2Q8N5M1 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.4■□□□□ 0.22
ATPAF2Q8N5M1 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATPAF2Q8N5M1 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.4■□□□□ 0.22
ATPAF2Q8N5M1 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.4■□□□□ 0.22
ATPAF2Q8N5M1 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ATPAF2Q8N5M1 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms