Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC24.66■■□□□ 1.54
VPS8Q8N3P4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
VPS8Q8N3P4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC24.66■■□□□ 1.54
VPS8Q8N3P4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC24.65■■□□□ 1.54
VPS8Q8N3P4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
VPS8Q8N3P4 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
VPS8Q8N3P4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC24.65■■□□□ 1.54
VPS8Q8N3P4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
VPS8Q8N3P4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
VPS8Q8N3P4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC24.65■■□□□ 1.54
VPS8Q8N3P4 AC104596.2-201ENST00000512793 793 ntBASIC24.65■■□□□ 1.54
VPS8Q8N3P4 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
VPS8Q8N3P4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC24.65■■□□□ 1.54
VPS8Q8N3P4 AL359711.2-201ENST00000563105 872 ntBASIC24.65■■□□□ 1.54
VPS8Q8N3P4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC24.65■■□□□ 1.54
VPS8Q8N3P4 AC132938.2-201ENST00000579188 680 ntBASIC24.65■■□□□ 1.54
VPS8Q8N3P4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC24.65■■□□□ 1.54
VPS8Q8N3P4 AL591163.1-201ENST00000641757 987 ntBASIC24.65■■□□□ 1.54
VPS8Q8N3P4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
VPS8Q8N3P4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
VPS8Q8N3P4 DRD5P1-201ENST00000456605 1438 ntBASIC24.65■■□□□ 1.54
VPS8Q8N3P4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC24.65■■□□□ 1.54
VPS8Q8N3P4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
VPS8Q8N3P4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
VPS8Q8N3P4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC24.65■■□□□ 1.54
VPS8Q8N3P4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
VPS8Q8N3P4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
VPS8Q8N3P4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
VPS8Q8N3P4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
VPS8Q8N3P4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
VPS8Q8N3P4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
VPS8Q8N3P4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
VPS8Q8N3P4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
VPS8Q8N3P4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
VPS8Q8N3P4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
VPS8Q8N3P4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
VPS8Q8N3P4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
VPS8Q8N3P4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
VPS8Q8N3P4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.54
VPS8Q8N3P4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
VPS8Q8N3P4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
VPS8Q8N3P4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC24.64■■□□□ 1.54
VPS8Q8N3P4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
VPS8Q8N3P4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
VPS8Q8N3P4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC24.64■■□□□ 1.54
VPS8Q8N3P4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
VPS8Q8N3P4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
VPS8Q8N3P4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.54
VPS8Q8N3P4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC24.64■■□□□ 1.54
VPS8Q8N3P4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
VPS8Q8N3P4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC24.64■■□□□ 1.54
VPS8Q8N3P4 USP32P1-208ENST00000506594 1164 ntBASIC24.64■■□□□ 1.54
VPS8Q8N3P4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC24.64■■□□□ 1.54
VPS8Q8N3P4 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
VPS8Q8N3P4 MIR5189-201ENST00000577370 114 ntBASIC24.64■■□□□ 1.54
VPS8Q8N3P4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC24.64■■□□□ 1.54
VPS8Q8N3P4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.53
VPS8Q8N3P4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.53
VPS8Q8N3P4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
VPS8Q8N3P4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
VPS8Q8N3P4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
VPS8Q8N3P4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC24.63■■□□□ 1.53
VPS8Q8N3P4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
VPS8Q8N3P4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
VPS8Q8N3P4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC24.63■■□□□ 1.53
VPS8Q8N3P4 AL162726.2-201ENST00000438986 1017 ntBASIC24.63■■□□□ 1.53
VPS8Q8N3P4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC24.63■■□□□ 1.53
VPS8Q8N3P4 GIMAP3P-201ENST00000495150 836 ntBASIC24.63■■□□□ 1.53
VPS8Q8N3P4 HNRNPA1P13-201ENST00000510646 963 ntBASIC24.63■■□□□ 1.53
VPS8Q8N3P4 CFL1-212ENST00000531413 636 ntTSL 3 BASIC24.63■■□□□ 1.53
VPS8Q8N3P4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
VPS8Q8N3P4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC24.63■■□□□ 1.53
VPS8Q8N3P4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
VPS8Q8N3P4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC24.63■■□□□ 1.53
VPS8Q8N3P4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
VPS8Q8N3P4 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
VPS8Q8N3P4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
VPS8Q8N3P4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
VPS8Q8N3P4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
VPS8Q8N3P4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
VPS8Q8N3P4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
VPS8Q8N3P4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC24.63■■□□□ 1.53
VPS8Q8N3P4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC24.63■■□□□ 1.53
VPS8Q8N3P4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
VPS8Q8N3P4 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
VPS8Q8N3P4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
VPS8Q8N3P4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
VPS8Q8N3P4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
VPS8Q8N3P4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC24.62■■□□□ 1.53
VPS8Q8N3P4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC24.62■■□□□ 1.53
VPS8Q8N3P4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC24.62■■□□□ 1.53
VPS8Q8N3P4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
VPS8Q8N3P4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
VPS8Q8N3P4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
VPS8Q8N3P4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
VPS8Q8N3P4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC24.62■■□□□ 1.53
VPS8Q8N3P4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
VPS8Q8N3P4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
VPS8Q8N3P4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
VPS8Q8N3P4 AC084364.1-201ENST00000551967 1556 ntBASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms