Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS52Q8N1B4 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
VPS52Q8N1B4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VPS52Q8N1B4 AL645728.1-201ENST00000366221 2101 ntBASIC17.4■□□□□ 0.38
VPS52Q8N1B4 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.4■□□□□ 0.38
VPS52Q8N1B4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
VPS52Q8N1B4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS52Q8N1B4 ATP5G2P4-201ENST00000442175 420 ntBASIC17.4■□□□□ 0.38
VPS52Q8N1B4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.4■□□□□ 0.38
VPS52Q8N1B4 SERBP1P3-201ENST00000459980 809 ntBASIC17.4■□□□□ 0.38
VPS52Q8N1B4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
VPS52Q8N1B4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.4■□□□□ 0.38
VPS52Q8N1B4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.4■□□□□ 0.38
VPS52Q8N1B4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.4■□□□□ 0.38
VPS52Q8N1B4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.4■□□□□ 0.38
VPS52Q8N1B4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.4■□□□□ 0.38
VPS52Q8N1B4 AC061975.2-201ENST00000581722 295 ntBASIC17.4■□□□□ 0.38
VPS52Q8N1B4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
VPS52Q8N1B4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.4■□□□□ 0.38
VPS52Q8N1B4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
VPS52Q8N1B4 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS52Q8N1B4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS52Q8N1B4 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS52Q8N1B4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
VPS52Q8N1B4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS52Q8N1B4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.4■□□□□ 0.38
VPS52Q8N1B4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VPS52Q8N1B4 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS52Q8N1B4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS52Q8N1B4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.4■□□□□ 0.38
VPS52Q8N1B4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS52Q8N1B4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.4■□□□□ 0.38
VPS52Q8N1B4 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
VPS52Q8N1B4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
VPS52Q8N1B4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.39■□□□□ 0.38
VPS52Q8N1B4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.39■□□□□ 0.38
VPS52Q8N1B4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
VPS52Q8N1B4 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
VPS52Q8N1B4 AL596257.1-201ENST00000641463 2694 ntBASIC17.39■□□□□ 0.37
VPS52Q8N1B4 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS52Q8N1B4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS52Q8N1B4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.39■□□□□ 0.37
VPS52Q8N1B4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.39■□□□□ 0.37
VPS52Q8N1B4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS52Q8N1B4 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS52Q8N1B4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
VPS52Q8N1B4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS52Q8N1B4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VPS52Q8N1B4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.39■□□□□ 0.37
VPS52Q8N1B4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS52Q8N1B4 ARSEP1-201ENST00000420443 635 ntBASIC17.39■□□□□ 0.37
VPS52Q8N1B4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
VPS52Q8N1B4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
VPS52Q8N1B4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.39■□□□□ 0.37
VPS52Q8N1B4 INE1-201ENST00000456273 945 ntBASIC17.39■□□□□ 0.37
VPS52Q8N1B4 AC093004.1-201ENST00000508850 424 ntBASIC17.39■□□□□ 0.37
VPS52Q8N1B4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
VPS52Q8N1B4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.39■□□□□ 0.37
VPS52Q8N1B4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VPS52Q8N1B4 CHCHD2P3-201ENST00000603038 451 ntBASIC17.39■□□□□ 0.37
VPS52Q8N1B4 AC026979.3-201ENST00000607315 403 ntBASIC17.39■□□□□ 0.37
VPS52Q8N1B4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.39■□□□□ 0.37
VPS52Q8N1B4 AC004790.1-201ENST00000612686 536 ntBASIC17.39■□□□□ 0.37
VPS52Q8N1B4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
VPS52Q8N1B4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
VPS52Q8N1B4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS52Q8N1B4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VPS52Q8N1B4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS52Q8N1B4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.39■□□□□ 0.37
VPS52Q8N1B4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.39■□□□□ 0.37
VPS52Q8N1B4 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS52Q8N1B4 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS52Q8N1B4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.39■□□□□ 0.37
VPS52Q8N1B4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS52Q8N1B4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 AP006294.1-201ENST00000415407 339 ntBASIC17.38■□□□□ 0.37
VPS52Q8N1B4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 RN7SL752P-201ENST00000463779 287 ntBASIC17.38■□□□□ 0.37
VPS52Q8N1B4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 GIMAP3P-201ENST00000495150 836 ntBASIC17.38■□□□□ 0.37
VPS52Q8N1B4 SPDYE18-201ENST00000510091 1050 ntBASIC17.38■□□□□ 0.37
VPS52Q8N1B4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 MIR6752-201ENST00000618442 71 ntBASIC17.38■□□□□ 0.37
VPS52Q8N1B4 AL033527.5-202ENST00000641632 1098 ntBASIC17.38■□□□□ 0.37
VPS52Q8N1B4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS52Q8N1B4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms