Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 AL451050.2-201ENST00000606967 682 ntBASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 AC132938.4-201ENST00000623835 848 ntBASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 AC011477.6-201ENST00000604980 1927 ntBASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL27A1Q8IZC6 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 AKR7A2P1-201ENST00000460134 915 ntBASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 BX539320.1-201ENST00000623759 877 ntBASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 AC069224.1-201ENST00000566372 1715 ntBASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 SLC25A24P2-201ENST00000415059 510 ntBASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 AC044849.1-201ENST00000519737 1188 ntBASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 RN7SL713P-201ENST00000582127 302 ntBASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL27A1Q8IZC6 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL27A1Q8IZC6 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.71□□□□□ -0.05
COL27A1Q8IZC6 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
COL27A1Q8IZC6 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.71□□□□□ -0.05
COL27A1Q8IZC6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL27A1Q8IZC6 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
COL27A1Q8IZC6 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL27A1Q8IZC6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
COL27A1Q8IZC6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL27A1Q8IZC6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
COL27A1Q8IZC6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.71□□□□□ -0.05
COL27A1Q8IZC6 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
COL27A1Q8IZC6 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.71□□□□□ -0.05
COL27A1Q8IZC6 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COL27A1Q8IZC6 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COL27A1Q8IZC6 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.71□□□□□ -0.05
COL27A1Q8IZC6 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COL27A1Q8IZC6 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.71□□□□□ -0.05
COL27A1Q8IZC6 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.71□□□□□ -0.05
COL27A1Q8IZC6 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.71□□□□□ -0.05
COL27A1Q8IZC6 SERPINA13P-202ENST00000478994 924 ntBASIC14.71□□□□□ -0.05
COL27A1Q8IZC6 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COL27A1Q8IZC6 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.71□□□□□ -0.05
COL27A1Q8IZC6 MIR3619-201ENST00000579667 83 ntBASIC14.71□□□□□ -0.05
COL27A1Q8IZC6 MIR4783-201ENST00000580343 82 ntBASIC14.71□□□□□ -0.05
COL27A1Q8IZC6 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.71□□□□□ -0.05
COL27A1Q8IZC6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
COL27A1Q8IZC6 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
COL27A1Q8IZC6 KRT8P19-201ENST00000551916 1455 ntBASIC14.71□□□□□ -0.06
COL27A1Q8IZC6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
COL27A1Q8IZC6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
COL27A1Q8IZC6 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
COL27A1Q8IZC6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
COL27A1Q8IZC6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.7□□□□□ -0.06
COL27A1Q8IZC6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms