Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC83Q8IWF9 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC83Q8IWF9 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC83Q8IWF9 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC83Q8IWF9 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC83Q8IWF9 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC83Q8IWF9 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC83Q8IWF9 KRT8P48-201ENST00000515599 1220 ntBASIC18.84■□□□□ 0.61
CCDC83Q8IWF9 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC83Q8IWF9 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC83Q8IWF9 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.84■□□□□ 0.61
CCDC83Q8IWF9 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC83Q8IWF9 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC83Q8IWF9 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC83Q8IWF9 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC83Q8IWF9 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC83Q8IWF9 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC83Q8IWF9 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC83Q8IWF9 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CCDC83Q8IWF9 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC83Q8IWF9 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CCDC83Q8IWF9 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC83Q8IWF9 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC83Q8IWF9 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC83Q8IWF9 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CCDC83Q8IWF9 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC83Q8IWF9 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.83■□□□□ 0.61
CCDC83Q8IWF9 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC83Q8IWF9 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC83Q8IWF9 SPCS2P4-201ENST00000436160 681 ntBASIC18.83■□□□□ 0.6
CCDC83Q8IWF9 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC83Q8IWF9 RNA5SP410-201ENST00000516285 106 ntBASIC18.83■□□□□ 0.6
CCDC83Q8IWF9 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC83Q8IWF9 AC024267.1-201ENST00000582320 895 ntBASIC18.83■□□□□ 0.6
CCDC83Q8IWF9 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC83Q8IWF9 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC83Q8IWF9 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC83Q8IWF9 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC83Q8IWF9 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC83Q8IWF9 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CCDC83Q8IWF9 AC105250.1-201ENST00000509378 2057 ntBASIC18.83■□□□□ 0.6
CCDC83Q8IWF9 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC83Q8IWF9 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CCDC83Q8IWF9 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC83Q8IWF9 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC83Q8IWF9 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC83Q8IWF9 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC83Q8IWF9 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC83Q8IWF9 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CCDC83Q8IWF9 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC83Q8IWF9 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC83Q8IWF9 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC83Q8IWF9 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC83Q8IWF9 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC83Q8IWF9 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC83Q8IWF9 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC83Q8IWF9 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC83Q8IWF9 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC83Q8IWF9 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.82■□□□□ 0.6
CCDC83Q8IWF9 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CCDC83Q8IWF9 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC83Q8IWF9 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.82■□□□□ 0.6
CCDC83Q8IWF9 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CCDC83Q8IWF9 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC83Q8IWF9 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC83Q8IWF9 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC83Q8IWF9 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC83Q8IWF9 AL136982.4-201ENST00000437689 1740 ntBASIC18.82■□□□□ 0.6
CCDC83Q8IWF9 AC090616.6-203ENST00000579186 1945 ntBASIC18.82■□□□□ 0.6
CCDC83Q8IWF9 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC83Q8IWF9 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC83Q8IWF9 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC83Q8IWF9 AC087481.3-201ENST00000602886 1894 ntBASIC18.82■□□□□ 0.6
CCDC83Q8IWF9 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC83Q8IWF9 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
CCDC83Q8IWF9 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC83Q8IWF9 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC83Q8IWF9 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC83Q8IWF9 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC83Q8IWF9 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC83Q8IWF9 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC83Q8IWF9 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC83Q8IWF9 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC83Q8IWF9 TMBIM7P-203ENST00000641617 1718 ntBASIC18.81■□□□□ 0.6
CCDC83Q8IWF9 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC83Q8IWF9 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC83Q8IWF9 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC83Q8IWF9 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC83Q8IWF9 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC83Q8IWF9 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC83Q8IWF9 POLD2P1-201ENST00000511220 997 ntBASIC18.81■□□□□ 0.6
CCDC83Q8IWF9 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC83Q8IWF9 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC83Q8IWF9 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC83Q8IWF9 AC243562.2-201ENST00000561247 970 ntBASIC18.81■□□□□ 0.6
CCDC83Q8IWF9 AP000842.3-202ENST00000569238 1080 ntBASIC18.81■□□□□ 0.6
CCDC83Q8IWF9 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC83Q8IWF9 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.81■□□□□ 0.6
CCDC83Q8IWF9 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC83Q8IWF9 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms