Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHD1LQ86WJ1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.77■□□□□ 0.76
CHD1LQ86WJ1 AL513210.1-201ENST00000629608 234 ntBASIC19.77■□□□□ 0.76
CHD1LQ86WJ1 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC19.77■□□□□ 0.76
CHD1LQ86WJ1 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHD1LQ86WJ1 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHD1LQ86WJ1 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHD1LQ86WJ1 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.77■□□□□ 0.76
CHD1LQ86WJ1 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHD1LQ86WJ1 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHD1LQ86WJ1 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.77■□□□□ 0.75
CHD1LQ86WJ1 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHD1LQ86WJ1 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHD1LQ86WJ1 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 AC093520.2-201ENST00000561830 333 ntBASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 AC055717.3-201ENST00000622967 595 ntBASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.76■□□□□ 0.75
CHD1LQ86WJ1 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 MIR4469-201ENST00000583919 79 ntBASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 AC006486.2-201ENST00000624246 2199 ntBASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 AL109954.1-202ENST00000564051 2148 ntBASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHD1LQ86WJ1 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 AC004461.1-201ENST00000412461 403 ntBASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 DNAJB3-201ENST00000446806 729 ntBASIC19.74■□□□□ 0.75
CHD1LQ86WJ1 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms