Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBE3BQ7Z3V4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE3BQ7Z3V4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.86■□□□□ 0.77
UBE3BQ7Z3V4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
UBE3BQ7Z3V4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 AL512384.1-201ENST00000406683 331 ntBASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 RN7SL399P-201ENST00000471648 279 ntBASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 WFDC1-204ENST00000613603 549 ntBASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 LINC02199-201ENST00000506655 2702 ntBASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBE3BQ7Z3V4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE3BQ7Z3V4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE3BQ7Z3V4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
UBE3BQ7Z3V4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBE3BQ7Z3V4 AC011477.6-201ENST00000604980 1927 ntBASIC19.84■□□□□ 0.77
UBE3BQ7Z3V4 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
UBE3BQ7Z3V4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
UBE3BQ7Z3V4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
UBE3BQ7Z3V4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
UBE3BQ7Z3V4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
UBE3BQ7Z3V4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE3BQ7Z3V4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE3BQ7Z3V4 GK-202ENST00000378941 458 ntTSL 3 BASIC19.84■□□□□ 0.77
UBE3BQ7Z3V4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC19.84■□□□□ 0.77
UBE3BQ7Z3V4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC19.84■□□□□ 0.77
UBE3BQ7Z3V4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.84■□□□□ 0.77
UBE3BQ7Z3V4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.84■□□□□ 0.77
UBE3BQ7Z3V4 SLED1-202ENST00000512051 380 ntBASIC19.84■□□□□ 0.77
UBE3BQ7Z3V4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC19.84■□□□□ 0.77
UBE3BQ7Z3V4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
UBE3BQ7Z3V4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
UBE3BQ7Z3V4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE3BQ7Z3V4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
UBE3BQ7Z3V4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
UBE3BQ7Z3V4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBE3BQ7Z3V4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.84■□□□□ 0.77
UBE3BQ7Z3V4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE3BQ7Z3V4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
UBE3BQ7Z3V4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
UBE3BQ7Z3V4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBE3BQ7Z3V4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBE3BQ7Z3V4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.83■□□□□ 0.77
UBE3BQ7Z3V4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC19.83■□□□□ 0.77
UBE3BQ7Z3V4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.83■□□□□ 0.77
UBE3BQ7Z3V4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBE3BQ7Z3V4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UBE3BQ7Z3V4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBE3BQ7Z3V4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
UBE3BQ7Z3V4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UBE3BQ7Z3V4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBE3BQ7Z3V4 TOMM22P5-201ENST00000416399 439 ntBASIC19.83■□□□□ 0.77
UBE3BQ7Z3V4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
UBE3BQ7Z3V4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.83■□□□□ 0.77
UBE3BQ7Z3V4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBE3BQ7Z3V4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBE3BQ7Z3V4 RN7SL837P-201ENST00000463010 287 ntBASIC19.83■□□□□ 0.77
UBE3BQ7Z3V4 GIMAP3P-201ENST00000495150 836 ntBASIC19.83■□□□□ 0.77
UBE3BQ7Z3V4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC19.83■□□□□ 0.77
UBE3BQ7Z3V4 TMEM261P1-201ENST00000604899 340 ntBASIC19.83■□□□□ 0.77
UBE3BQ7Z3V4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
UBE3BQ7Z3V4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
UBE3BQ7Z3V4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
UBE3BQ7Z3V4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBE3BQ7Z3V4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
UBE3BQ7Z3V4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 AC069224.1-201ENST00000566372 1715 ntBASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBE3BQ7Z3V4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms