Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
USP45Q70EL2 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
USP45Q70EL2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
USP45Q70EL2 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
USP45Q70EL2 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
USP45Q70EL2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
USP45Q70EL2 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
USP45Q70EL2 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
USP45Q70EL2 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
USP45Q70EL2 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
USP45Q70EL2 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.04■□□□□ 0.16
USP45Q70EL2 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
USP45Q70EL2 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.04■□□□□ 0.16
USP45Q70EL2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.04■□□□□ 0.16
USP45Q70EL2 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.04■□□□□ 0.16
USP45Q70EL2 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.04■□□□□ 0.16
USP45Q70EL2 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.04■□□□□ 0.16
USP45Q70EL2 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.04■□□□□ 0.16
USP45Q70EL2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.04■□□□□ 0.16
USP45Q70EL2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.04■□□□□ 0.16
USP45Q70EL2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
USP45Q70EL2 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.04■□□□□ 0.16
USP45Q70EL2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
USP45Q70EL2 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
USP45Q70EL2 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
USP45Q70EL2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
USP45Q70EL2 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
USP45Q70EL2 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
USP45Q70EL2 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
USP45Q70EL2 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.04■□□□□ 0.16
USP45Q70EL2 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.04■□□□□ 0.16
USP45Q70EL2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
USP45Q70EL2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
USP45Q70EL2 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
USP45Q70EL2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
USP45Q70EL2 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
USP45Q70EL2 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
USP45Q70EL2 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
USP45Q70EL2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
USP45Q70EL2 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
USP45Q70EL2 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
USP45Q70EL2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
USP45Q70EL2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
USP45Q70EL2 AL603832.2-201ENST00000566195 2125 ntBASIC16.03■□□□□ 0.16
USP45Q70EL2 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
USP45Q70EL2 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
USP45Q70EL2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
USP45Q70EL2 AL391005.1-201ENST00000623953 2435 ntBASIC16.03■□□□□ 0.16
USP45Q70EL2 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
USP45Q70EL2 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.03■□□□□ 0.16
USP45Q70EL2 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
USP45Q70EL2 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.03■□□□□ 0.16
USP45Q70EL2 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
USP45Q70EL2 TSSK5P-201ENST00000423978 907 ntBASIC16.03■□□□□ 0.16
USP45Q70EL2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.03■□□□□ 0.16
USP45Q70EL2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.03■□□□□ 0.16
USP45Q70EL2 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.03■□□□□ 0.16
USP45Q70EL2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.03■□□□□ 0.16
USP45Q70EL2 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.03■□□□□ 0.16
USP45Q70EL2 AL512361.1-201ENST00000554200 418 ntBASIC16.03■□□□□ 0.16
USP45Q70EL2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.03■□□□□ 0.16
USP45Q70EL2 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.03■□□□□ 0.16
USP45Q70EL2 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.03■□□□□ 0.16
USP45Q70EL2 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.03■□□□□ 0.16
USP45Q70EL2 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
USP45Q70EL2 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.03■□□□□ 0.16
USP45Q70EL2 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
USP45Q70EL2 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
USP45Q70EL2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
USP45Q70EL2 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.03■□□□□ 0.16
USP45Q70EL2 AC024909.3-201ENST00000611513 2257 ntBASIC16.03■□□□□ 0.16
USP45Q70EL2 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
USP45Q70EL2 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
USP45Q70EL2 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
USP45Q70EL2 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
USP45Q70EL2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
USP45Q70EL2 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
USP45Q70EL2 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.02■□□□□ 0.16
USP45Q70EL2 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
USP45Q70EL2 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
USP45Q70EL2 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
USP45Q70EL2 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
USP45Q70EL2 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
USP45Q70EL2 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.02■□□□□ 0.16
USP45Q70EL2 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
USP45Q70EL2 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
USP45Q70EL2 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
USP45Q70EL2 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.02■□□□□ 0.16
USP45Q70EL2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.02■□□□□ 0.16
USP45Q70EL2 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
USP45Q70EL2 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.02■□□□□ 0.16
USP45Q70EL2 AC004890.2-204ENST00000481968 304 ntBASIC16.02■□□□□ 0.16
USP45Q70EL2 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.02■□□□□ 0.16
USP45Q70EL2 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.02■□□□□ 0.16
USP45Q70EL2 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
USP45Q70EL2 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.02■□□□□ 0.16
USP45Q70EL2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.02■□□□□ 0.16
USP45Q70EL2 AC010336.2-201ENST00000564226 506 ntBASIC16.02■□□□□ 0.16
USP45Q70EL2 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.02■□□□□ 0.16
USP45Q70EL2 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms