Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 KRT8P22-201ENST00000562317 1415 ntBASIC16.75■□□□□ 0.27
CCDC149Q6ZUS6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
CCDC149Q6ZUS6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CCDC149Q6ZUS6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC149Q6ZUS6 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC149Q6ZUS6 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC149Q6ZUS6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CCDC149Q6ZUS6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC149Q6ZUS6 PDIA3P1-201ENST00000471856 1510 ntBASIC16.75■□□□□ 0.27
CCDC149Q6ZUS6 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC149Q6ZUS6 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CCDC149Q6ZUS6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC149Q6ZUS6 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 HAUS4P1-201ENST00000406739 1145 ntBASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 SLC25A47P1-201ENST00000531577 414 ntBASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 AL022328.1-201ENST00000610050 478 ntBASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 RPSAP52-203ENST00000622976 1023 ntBASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 CU634019.7-201ENST00000624153 1185 ntBASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 FP236241.2-201ENST00000624906 1185 ntBASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC149Q6ZUS6 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 FAM86LP-201ENST00000478302 853 ntBASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 RPL13AP25-201ENST00000484130 612 ntBASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC149Q6ZUS6 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms