Protein–RNA interactions for Protein: Q6ZSB3

LINC00299, Putative uncharacterized protein encoded by LINC00299, humanhuman

Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299Q6ZSB3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 AC073648.6-201ENST00000641589 218 ntBASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00299Q6ZSB3 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 GXYLT1P3-201ENST00000453058 1193 ntBASIC14□□□□□ -0.17
LINC00299Q6ZSB3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 RPPH1-201ENST00000516869 333 ntBASIC14□□□□□ -0.17
LINC00299Q6ZSB3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 AC087641.1-201ENST00000557561 1021 ntBASIC14□□□□□ -0.17
LINC00299Q6ZSB3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00299Q6ZSB3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 PAWRP1-201ENST00000451083 565 ntBASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 AP001412.1-201ENST00000608405 714 ntBASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00299Q6ZSB3 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms