Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 AL078644.1-201ENST00000609881 752 ntBASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 AL589182.2-201ENST00000619332 1049 ntBASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 AC091951.1-201ENST00000512854 2465 ntBASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXR1Q6PIV2 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 AC002310.6-201ENST00000624451 1377 ntBASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 PRYP5-201ENST00000451909 266 ntBASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 AC108073.2-201ENST00000464002 357 ntBASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 AC002558.1-201ENST00000488906 803 ntBASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 AC073592.4-201ENST00000623827 446 ntBASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
FOXR1Q6PIV2 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 MCCD1P2-201ENST00000423228 335 ntBASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 AP006288.1-201ENST00000446065 395 ntBASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 AC004706.3-202ENST00000621574 984 ntBASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXR1Q6PIV2 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms