Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 SLC25A24P2-201ENST00000415059 510 ntBASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 AC007969.1-201ENST00000433675 447 ntBASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 AL591846.1-201ENST00000451736 433 ntBASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 AC145423.3-201ENST00000615987 467 ntBASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 AL008638.5-201ENST00000623814 1298 ntBASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 AC132938.4-201ENST00000623835 848 ntBASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17■□□□□ 0.31
CNKSR3Q6P9H4 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 AC244452.3-201ENST00000636814 210 ntBASIC17■□□□□ 0.31
CNKSR3Q6P9H4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17■□□□□ 0.31
CNKSR3Q6P9H4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms