Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 TTTY23B-201ENST00000442790 549 ntBASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 ACA64.2-201ENST00000459014 129 ntBASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 KRT17P8-201ENST00000540749 863 ntBASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 AL158212.4-201ENST00000624062 1286 ntBASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 CLK3P2-201ENST00000427566 1453 ntBASIC17.95■□□□□ 0.46
CCDC62Q6P9F0 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 RPSAP52-203ENST00000622976 1023 ntBASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CCDC62Q6P9F0 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CCDC62Q6P9F0 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC62Q6P9F0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC62Q6P9F0 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC62Q6P9F0 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC62Q6P9F0 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC62Q6P9F0 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC62Q6P9F0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC62Q6P9F0 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC62Q6P9F0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC62Q6P9F0 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC62Q6P9F0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC62Q6P9F0 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC62Q6P9F0 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC62Q6P9F0 TMEM14DP-201ENST00000422205 345 ntBASIC17.93■□□□□ 0.46
CCDC62Q6P9F0 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC62Q6P9F0 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC62Q6P9F0 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC62Q6P9F0 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC62Q6P9F0 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.93■□□□□ 0.46
CCDC62Q6P9F0 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.93■□□□□ 0.46
CCDC62Q6P9F0 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC62Q6P9F0 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC62Q6P9F0 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC62Q6P9F0 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms