Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
VARS2Q5ST30 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VARS2Q5ST30 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VARS2Q5ST30 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.91■□□□□ 0.3
VARS2Q5ST30 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.91■□□□□ 0.3
VARS2Q5ST30 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
VARS2Q5ST30 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VARS2Q5ST30 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.91■□□□□ 0.3
VARS2Q5ST30 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
VARS2Q5ST30 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.91■□□□□ 0.3
VARS2Q5ST30 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VARS2Q5ST30 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VARS2Q5ST30 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VARS2Q5ST30 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.9■□□□□ 0.3
VARS2Q5ST30 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.9■□□□□ 0.3
VARS2Q5ST30 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VARS2Q5ST30 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.9■□□□□ 0.3
VARS2Q5ST30 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VARS2Q5ST30 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
VARS2Q5ST30 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VARS2Q5ST30 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.9■□□□□ 0.3
VARS2Q5ST30 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.9■□□□□ 0.3
VARS2Q5ST30 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
VARS2Q5ST30 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.9■□□□□ 0.3
VARS2Q5ST30 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
VARS2Q5ST30 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
VARS2Q5ST30 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.9■□□□□ 0.3
VARS2Q5ST30 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.9■□□□□ 0.3
VARS2Q5ST30 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.9■□□□□ 0.3
VARS2Q5ST30 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.9■□□□□ 0.3
VARS2Q5ST30 RN7SL399P-201ENST00000471648 279 ntBASIC16.9■□□□□ 0.3
VARS2Q5ST30 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VARS2Q5ST30 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.9■□□□□ 0.3
VARS2Q5ST30 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.9■□□□□ 0.3
VARS2Q5ST30 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.9■□□□□ 0.3
VARS2Q5ST30 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
VARS2Q5ST30 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.9■□□□□ 0.3
VARS2Q5ST30 AL450472.2-201ENST00000603663 1156 ntBASIC16.9■□□□□ 0.3
VARS2Q5ST30 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.9■□□□□ 0.3
VARS2Q5ST30 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
VARS2Q5ST30 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.9■□□□□ 0.3
VARS2Q5ST30 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VARS2Q5ST30 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VARS2Q5ST30 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
VARS2Q5ST30 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VARS2Q5ST30 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VARS2Q5ST30 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.9■□□□□ 0.3
VARS2Q5ST30 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VARS2Q5ST30 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VARS2Q5ST30 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VARS2Q5ST30 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VARS2Q5ST30 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
VARS2Q5ST30 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
VARS2Q5ST30 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
VARS2Q5ST30 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
VARS2Q5ST30 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
VARS2Q5ST30 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VARS2Q5ST30 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VARS2Q5ST30 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VARS2Q5ST30 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.89■□□□□ 0.29
VARS2Q5ST30 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VARS2Q5ST30 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VARS2Q5ST30 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
VARS2Q5ST30 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VARS2Q5ST30 AL078595.1-201ENST00000404458 226 ntBASIC16.89■□□□□ 0.29
VARS2Q5ST30 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VARS2Q5ST30 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.89■□□□□ 0.29
VARS2Q5ST30 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
VARS2Q5ST30 KRT18P64-201ENST00000434946 1219 ntBASIC16.89■□□□□ 0.29
VARS2Q5ST30 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.89■□□□□ 0.29
VARS2Q5ST30 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.89■□□□□ 0.29
VARS2Q5ST30 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.89■□□□□ 0.29
VARS2Q5ST30 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.89■□□□□ 0.29
VARS2Q5ST30 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.89■□□□□ 0.29
VARS2Q5ST30 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.89■□□□□ 0.29
VARS2Q5ST30 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.89■□□□□ 0.29
VARS2Q5ST30 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.89■□□□□ 0.29
VARS2Q5ST30 AC092552.1-201ENST00000547243 906 ntBASIC16.89■□□□□ 0.29
VARS2Q5ST30 HNRNPUP1-201ENST00000554987 333 ntBASIC16.89■□□□□ 0.29
VARS2Q5ST30 AC036164.1-201ENST00000570544 333 ntBASIC16.89■□□□□ 0.29
VARS2Q5ST30 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.89■□□□□ 0.29
VARS2Q5ST30 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.89■□□□□ 0.29
VARS2Q5ST30 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
VARS2Q5ST30 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
VARS2Q5ST30 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
VARS2Q5ST30 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
VARS2Q5ST30 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VARS2Q5ST30 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.89■□□□□ 0.29
VARS2Q5ST30 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VARS2Q5ST30 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
VARS2Q5ST30 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
VARS2Q5ST30 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
VARS2Q5ST30 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.88■□□□□ 0.29
VARS2Q5ST30 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
VARS2Q5ST30 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VARS2Q5ST30 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VARS2Q5ST30 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
VARS2Q5ST30 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VARS2Q5ST30 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
VARS2Q5ST30 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms