Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 AL589182.2-201ENST00000619332 1049 ntBASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ANKRD55Q3KP44 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 FOSL1P1-201ENST00000511041 816 ntBASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 MIR5100-201ENST00000579544 119 ntBASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 AC005412.3-201ENST00000580309 715 ntBASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 AC138894.3-201ENST00000603787 634 ntBASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 GRK6P1-201ENST00000400595 1711 ntBASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ANKRD55Q3KP44 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ANKRD55Q3KP44 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ANKRD55Q3KP44 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ANKRD55Q3KP44 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ANKRD55Q3KP44 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ANKRD55Q3KP44 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ANKRD55Q3KP44 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ANKRD55Q3KP44 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ANKRD55Q3KP44 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.35□□□□□ -0.27
ANKRD55Q3KP44 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.35□□□□□ -0.27
ANKRD55Q3KP44 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ANKRD55Q3KP44 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
ANKRD55Q3KP44 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ANKRD55Q3KP44 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.35□□□□□ -0.27
ANKRD55Q3KP44 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ANKRD55Q3KP44 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ANKRD55Q3KP44 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.35□□□□□ -0.27
ANKRD55Q3KP44 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ANKRD55Q3KP44 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ANKRD55Q3KP44 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ANKRD55Q3KP44 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ANKRD55Q3KP44 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.35□□□□□ -0.27
ANKRD55Q3KP44 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ANKRD55Q3KP44 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.35□□□□□ -0.27
ANKRD55Q3KP44 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ANKRD55Q3KP44 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ANKRD55Q3KP44 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms