Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM71Q2Q1W2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 AL121723.1-201ENST00000445194 1519 ntBASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 AC134312.5-201ENST00000568031 1313 ntBASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 RN7SL219P-201ENST00000582872 296 ntBASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM71Q2Q1W2 AL133338.1-201ENST00000565695 1517 ntBASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 AC026410.3-201ENST00000514280 936 ntBASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 GNRHR2-203ENST00000581100 1187 ntBASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 FZD10-202ENST00000539839 3282 ntBASIC17.31■□□□□ 0.36
TRIM71Q2Q1W2 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 KRT8P44-201ENST00000441609 1350 ntBASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM71Q2Q1W2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms