Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RSPO4Q2I0M5 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 AC091544.8-201ENST00000619490 361 ntBASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 AC148477.9-201ENST00000623974 539 ntBASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 CROCCP2-202ENST00000412962 2773 ntBASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RSPO4Q2I0M5 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 NKAIN1P1-201ENST00000435754 582 ntBASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 AC044849.1-201ENST00000519737 1188 ntBASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 AC011491.1-203ENST00000637688 543 ntBASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RSPO4Q2I0M5 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 PCDHA12-202ENST00000613593 2588 ntBASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms