Protein–RNA interactions for Protein: Q05655

PRKCD, Protein kinase C delta type, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCDQ05655 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRKCDQ05655 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.81□□□□□ -0.04
PRKCDQ05655 AC067930.6-201ENST00000623257 4947 ntBASIC14.81□□□□□ -0.04
PRKCDQ05655 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PRKCDQ05655 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PRKCDQ05655 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRKCDQ05655 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRKCDQ05655 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRKCDQ05655 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.81□□□□□ -0.04
PRKCDQ05655 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PRKCDQ05655 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRKCDQ05655 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRKCDQ05655 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRKCDQ05655 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PRKCDQ05655 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRKCDQ05655 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRKCDQ05655 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.81□□□□□ -0.04
PRKCDQ05655 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRKCDQ05655 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRKCDQ05655 HAUS4P1-201ENST00000406739 1145 ntBASIC14.81□□□□□ -0.04
PRKCDQ05655 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PRKCDQ05655 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.81□□□□□ -0.04
PRKCDQ05655 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.81□□□□□ -0.04
PRKCDQ05655 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.81□□□□□ -0.04
PRKCDQ05655 AC093909.1-201ENST00000504731 1122 ntBASIC14.81□□□□□ -0.04
PRKCDQ05655 RNA5SP415-201ENST00000517246 115 ntBASIC14.81□□□□□ -0.04
PRKCDQ05655 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRKCDQ05655 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.81□□□□□ -0.04
PRKCDQ05655 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRKCDQ05655 AL078644.1-201ENST00000609881 752 ntBASIC14.81□□□□□ -0.04
PRKCDQ05655 AC010507.1-201ENST00000633895 436 ntBASIC14.81□□□□□ -0.04
PRKCDQ05655 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRKCDQ05655 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.81□□□□□ -0.04
PRKCDQ05655 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRKCDQ05655 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PRKCDQ05655 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PRKCDQ05655 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRKCDQ05655 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRKCDQ05655 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.81□□□□□ -0.04
PRKCDQ05655 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PRKCDQ05655 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRKCDQ05655 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PRKCDQ05655 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.81□□□□□ -0.04
PRKCDQ05655 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRKCDQ05655 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
PRKCDQ05655 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PRKCDQ05655 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRKCDQ05655 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.81□□□□□ -0.04
PRKCDQ05655 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRKCDQ05655 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRKCDQ05655 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.8□□□□□ -0.04
PRKCDQ05655 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRKCDQ05655 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PRKCDQ05655 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.8□□□□□ -0.04
PRKCDQ05655 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
PRKCDQ05655 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRKCDQ05655 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PRKCDQ05655 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRKCDQ05655 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PRKCDQ05655 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRKCDQ05655 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRKCDQ05655 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRKCDQ05655 SSR4P1-203ENST00000599569 2260 ntBASIC14.8□□□□□ -0.04
PRKCDQ05655 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRKCDQ05655 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRKCDQ05655 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRKCDQ05655 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PRKCDQ05655 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRKCDQ05655 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.8□□□□□ -0.04
PRKCDQ05655 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PRKCDQ05655 RNA5SP419-201ENST00000515908 135 ntBASIC14.8□□□□□ -0.04
PRKCDQ05655 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PRKCDQ05655 IGHV3-22-201ENST00000520721 359 ntBASIC14.8□□□□□ -0.04
PRKCDQ05655 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.8□□□□□ -0.04
PRKCDQ05655 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.8□□□□□ -0.04
PRKCDQ05655 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
PRKCDQ05655 AL365330.1-201ENST00000607459 531 ntBASIC14.8□□□□□ -0.04
PRKCDQ05655 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.8□□□□□ -0.04
PRKCDQ05655 AC007064.4-201ENST00000637740 555 ntBASIC14.8□□□□□ -0.04
PRKCDQ05655 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRKCDQ05655 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRKCDQ05655 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRKCDQ05655 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PRKCDQ05655 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.8□□□□□ -0.04
PRKCDQ05655 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRKCDQ05655 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRKCDQ05655 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.8□□□□□ -0.04
PRKCDQ05655 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRKCDQ05655 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.8□□□□□ -0.04
PRKCDQ05655 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRKCDQ05655 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.8□□□□□ -0.04
PRKCDQ05655 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRKCDQ05655 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRKCDQ05655 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PRKCDQ05655 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.8□□□□□ -0.04
PRKCDQ05655 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRKCDQ05655 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.8□□□□□ -0.04
PRKCDQ05655 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRKCDQ05655 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PRKCDQ05655 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms